Gene Pfl01_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3419 
Symbol 
ID3713427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3900062 
End bp3900829 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content61% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_349148 
Protein GI77459641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.689572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGA CTCAGTTGTT CGACCTCGAC GGCAAGATCG CTTTCGTCTC CGGCGCCAGC 
CGTGGCATCG GTGAAGCCAT CGCCAAACTG CTGGCCCAGC AAGGTGCCCA CGTCATCGTT
TCGAGCCGCA AACTCGAAGG CTGCCAACAT GTGGCCGACG CCATCATCGC CGCCGGCGGC
AAGGCCACCG CCATCGCCTG CCACATTGGC GAAATGGAAC AGATCAGCCA GGTCTTCGCC
GGCATCAAGG AACAGTTCGG GCGCCTGGAC ATCCTGGTCA ACAACGCCGC GACCAACCCA
CAGTTCTGCA ACGTGCTGGA CACCGACCTC GGTGCCTTTC AGAAAACCGT CGACGTGAAC
ATCCGCGGCT ACTTCTTCAT GTCGGTGGAA GCCGGCAAGC TGATGCGCGA AAACGGCGGT
GGCAGCATCA TCAACGTGGC GTCGATCAAC GGCATTTCGC CAGGCGTCTT CCAGGGCATC
TACTCGGTGA CCAAAGCCGC GGTGATCAAC ATGACCAAAG TCTTCGCCAA GGAATGCGCG
CAGTTCGGCA TCCGCTGCAA CGCCCTGCTG CCAGGCCTGA CCGACACCAA ATTCGCCTCG
GCCCTGGTGA AGAACGACGC CATCCTGAAA CAGGCCCTGA CGCAGATCCC GCTCAAGCGC
GTAGCCGACC CAAGCGAAAT GGCCGGCGCC GTGCTGTACC TGGCGAGCGA TGCCTCGAGC
TACACCACCG GCGTATCGCT GAACGTGGAC GGCGGTTTCC TGTCCTGA
 
Protein sequence
MSKTQLFDLD GKIAFVSGAS RGIGEAIAKL LAQQGAHVIV SSRKLEGCQH VADAIIAAGG 
KATAIACHIG EMEQISQVFA GIKEQFGRLD ILVNNAATNP QFCNVLDTDL GAFQKTVDVN
IRGYFFMSVE AGKLMRENGG GSIINVASIN GISPGVFQGI YSVTKAAVIN MTKVFAKECA
QFGIRCNALL PGLTDTKFAS ALVKNDAILK QALTQIPLKR VADPSEMAGA VLYLASDASS
YTTGVSLNVD GGFLS