Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3419 |
Symbol | |
ID | 3713427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3900062 |
End bp | 3900829 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | short chain dehydrogenase |
Protein accession | YP_349148 |
Protein GI | 77459641 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.689572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGA CTCAGTTGTT CGACCTCGAC GGCAAGATCG CTTTCGTCTC CGGCGCCAGC CGTGGCATCG GTGAAGCCAT CGCCAAACTG CTGGCCCAGC AAGGTGCCCA CGTCATCGTT TCGAGCCGCA AACTCGAAGG CTGCCAACAT GTGGCCGACG CCATCATCGC CGCCGGCGGC AAGGCCACCG CCATCGCCTG CCACATTGGC GAAATGGAAC AGATCAGCCA GGTCTTCGCC GGCATCAAGG AACAGTTCGG GCGCCTGGAC ATCCTGGTCA ACAACGCCGC GACCAACCCA CAGTTCTGCA ACGTGCTGGA CACCGACCTC GGTGCCTTTC AGAAAACCGT CGACGTGAAC ATCCGCGGCT ACTTCTTCAT GTCGGTGGAA GCCGGCAAGC TGATGCGCGA AAACGGCGGT GGCAGCATCA TCAACGTGGC GTCGATCAAC GGCATTTCGC CAGGCGTCTT CCAGGGCATC TACTCGGTGA CCAAAGCCGC GGTGATCAAC ATGACCAAAG TCTTCGCCAA GGAATGCGCG CAGTTCGGCA TCCGCTGCAA CGCCCTGCTG CCAGGCCTGA CCGACACCAA ATTCGCCTCG GCCCTGGTGA AGAACGACGC CATCCTGAAA CAGGCCCTGA CGCAGATCCC GCTCAAGCGC GTAGCCGACC CAAGCGAAAT GGCCGGCGCC GTGCTGTACC TGGCGAGCGA TGCCTCGAGC TACACCACCG GCGTATCGCT GAACGTGGAC GGCGGTTTCC TGTCCTGA
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Protein sequence | MSKTQLFDLD GKIAFVSGAS RGIGEAIAKL LAQQGAHVIV SSRKLEGCQH VADAIIAAGG KATAIACHIG EMEQISQVFA GIKEQFGRLD ILVNNAATNP QFCNVLDTDL GAFQKTVDVN IRGYFFMSVE AGKLMRENGG GSIINVASIN GISPGVFQGI YSVTKAAVIN MTKVFAKECA QFGIRCNALL PGLTDTKFAS ALVKNDAILK QALTQIPLKR VADPSEMAGA VLYLASDASS YTTGVSLNVD GGFLS
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