| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5565 |
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| Symbol | |
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| ID | 8336925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6415720 |
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| End bp | 6416565 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644958669 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003116265 |
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| Protein GI | 256394701 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATG ACAACGACAC CACTCCCGGC GCTCCCATAA CCCCTGGCGC TCCTACAACC
CCGGGCGCTC CCGTGATCCC CAGCGCTCCC GTCGGCCTGC TCGCCGGCAA GGTCGTCTTC
ATCACCGGCG CCAGCCGCGG TATCGGCGCG GCCGCGGGCC GGCTGTTCGC CGCCGAGGGC
GCAGCTGTCG TCCTCGCGTC CCGCAGCACC GAGGCGTTGC AGCAGATCGT CACCGAGATC
CGCGCCGGTG GAGGCGTCGC GGACGCCGTG CCCCTCGACC TCGCGGACCG CGCGAGCATC
CGTGCGGCGC TCGACCGTGT CGAGGAGCTG CACGGCCGGC TCGACGGCGC CTTCAACAAC
GGCGCGGTCG TCCAGCGGCC CGGACCGCTC GACGCCACCA GCGACGAGGA CATCGAGGAG
CAGTTCGCGG TCAACTTCCG CGGCCATTGG ACCGCGATGA CCGCCGAGGC CGCGCTCATG
CGCCGCACCG GCGGCGGGGC GATCGTGAAC ACCTCCAGCA TCGGCAGCCG CCGCGCGAAC
CGGGCGCTGC CCGCCTACGG CGCCATGAAG CGCGCGCTCA ACAGCATCAC CGAGAGCGCC
GCTGTGACCT GGGCGGCGGA GGGAATCCGG GTCAACGGCA TCACTCCCGG CGGCACTGCC
ACCGAGATGA TGGACGCGTG GGAGGCGGCC TCGCCCGGCA TCATCCAGCG GAACATCGCG
GCGACCCCGC TCGGCCGGAT GGCCGAACCC CGCGAGGTCG CCGAGGCCGC CGCCTGGCTG
CTCAGCGACC GGGCCTCGGC GGTGACCGGC GCGATCGTGC CGGTCGACGG CGGCGCGGGC
GCCTGA
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| Protein sequence | MSNDNDTTPG APITPGAPTT PGAPVIPSAP VGLLAGKVVF ITGASRGIGA AAGRLFAAEG
AAVVLASRST EALQQIVTEI RAGGGVADAV PLDLADRASI RAALDRVEEL HGRLDGAFNN
GAVVQRPGPL DATSDEDIEE QFAVNFRGHW TAMTAEAALM RRTGGGAIVN TSSIGSRRAN
RALPAYGAMK RALNSITESA AVTWAAEGIR VNGITPGGTA TEMMDAWEAA SPGIIQRNIA
ATPLGRMAEP REVAEAAAWL LSDRASAVTG AIVPVDGGAG A
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