| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3291 |
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| Symbol | |
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| ID | 5198545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3621242 |
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| End bp | 3622039 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582836 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263775 |
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| Protein GI | 148556193 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.185202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAGA GGAATGGACG GATGCTGCTT AAGGACAAGG TGATCGTGAT CAGCGGCGTC
GGGCCCGGCA TGGGCCAGTC GCTCGCCAGG ATCGCGGCCG CGGAGGGCGC CAAGGTCGGC
CTCGGCGCGC GCAACAAGGC CTTCCTCGAC GAGGTGGCGG CCGACATCCG GGCGAAGGGC
GGGGAGGCGA TCGCGCTGCC CACCGACGTC ACCAGCGCCG AGCAGTGCCA GGCGCTGGCG
AAGGCCACGC TCGACGCGTT CGGCCGCATC GACGGGCTGA TCAACTCGGC CTACGCCCAT
GGCGAATGGA AGCCGACCGA CATCGCCAAT GTCGAGGAAT ATGCCGACGT CTTCAACGTC
AACTGCGCCG GCGCGCTGCG CATGGCGCAG GCCTGCCTGC CCGGGCTGAA GGCGTCGAAG
GGGGCGATCG TCAACGTCTC GACCATGTCG ACGGTCAATC CCTTCCCGGG CGAGGGCGCC
TATTCGGCGG GCAAGGGCGG CATGAACGCG CTGACCCGCC ACATGGCGAA GGATTTCGGC
CGGCACGGCA TCCGCGTGAA CGTCACCCGC ATGGGCTGGA TCGGCGGCGC GCCGGTGTGG
GGCCATATCG ACCGCGAGGT CGCCGCCGGC CGCGACCGCG ACGAGGTGAT CGGCGAGATC
ACGCAGCGCA TCCCGATCGG CATCATCCCG CCCGAGGAGG ATTGCGCCAA GGCGGTGCTG
TTCATGGTCT CGGATTATTC GAAGGTGGTC TCCGGCGCGT CGCTCGACGT CAACGGCGGC
CAGTATATGG CGCCATGA
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| Protein sequence | MQERNGRMLL KDKVIVISGV GPGMGQSLAR IAAAEGAKVG LGARNKAFLD EVAADIRAKG
GEAIALPTDV TSAEQCQALA KATLDAFGRI DGLINSAYAH GEWKPTDIAN VEEYADVFNV
NCAGALRMAQ ACLPGLKASK GAIVNVSTMS TVNPFPGEGA YSAGKGGMNA LTRHMAKDFG
RHGIRVNVTR MGWIGGAPVW GHIDREVAAG RDRDEVIGEI TQRIPIGIIP PEEDCAKAVL
FMVSDYSKVV SGASLDVNGG QYMAP
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