| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2636 |
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| Symbol | |
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| ID | 5059099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2957835 |
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| End bp | 2958611 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474892 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001159458 |
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| Protein GI | 145595161 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.842689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.311906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTCA CGGAGAAGAT CGTCGTGGTG GCCGGGGTCG GCCCCGGGCT GGGCCAGGCC
ATCGCGGTGC GTGCCGCGCA GGCCGGTGCC CACGTGGTGC TCGCCGCCCG CACCGGGTCC
TTCCTGAACG GGGTGGCCGG CAAGGTGCGG GCGGCAGGTC AGCGGGCCCT GGCGGTACCC
ACCGACCTCA CCGACGGCGA GTCGAGCGCC GCACTCGTGC GGGCCGCCCT CGCCGAGTTC
GGCCGCGTTG ACGTGCTGGT CAGCAACGCG TTCGAGATGC CGCCGATGCG GGGTCTCGGG
ACGGTCGAAC TGGCTGACCT ACGATCGAGC TTCGAGGTCA ACGTGCTTGC GGCGCTGCGT
ATGACTCGGC TGCTGACGCC CGCGTTGGTG GAGTCCGGCG GCAACGTGGT CATGGTCAAC
TCCGCGGTGC TGCGCCACTC CCGTCTGGCG TTCGGCCCGT ACAAGCTGGC CAAGGCCGCG
CTGCTCGCGG CGGCGCAGAA TCTGGCCACT GAACTCGGGC CGAGGGGCGT GCGGGTCAAT
TCGGTCGCAC CCGGCTGGAT CTGGGCCGAC AGCCTGCGGC TCTGGTTTGA CTACCAGGCG
AGTCAGCGTG GCGTGCCGCC CCAGCAGATC TACGACGAGG TCGCCGCTAC CACCGACCTG
GGCCGGCTGC CCGTGCCGGA CGAGGTCGCT GACGCCGTGC TGTTCCTCAG CTCCGGTCTG
GCTCGCGGCA TCACTGGTCA GTGCCTCGAC GTCAACTGCG GCGAGTTCCA TCACTGA
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| Protein sequence | MLLTEKIVVV AGVGPGLGQA IAVRAAQAGA HVVLAARTGS FLNGVAGKVR AAGQRALAVP
TDLTDGESSA ALVRAALAEF GRVDVLVSNA FEMPPMRGLG TVELADLRSS FEVNVLAALR
MTRLLTPALV ESGGNVVMVN SAVLRHSRLA FGPYKLAKAA LLAAAQNLAT ELGPRGVRVN
SVAPGWIWAD SLRLWFDYQA SQRGVPPQQI YDEVAATTDL GRLPVPDEVA DAVLFLSSGL
ARGITGQCLD VNCGEFHH
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