| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1909 |
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| Symbol | |
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| ID | 5192070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2184366 |
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| End bp | 2185133 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586373 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001267241 |
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| Protein GI | 148547139 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.569755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA CCCACCTGTT CGACCTCGAC GGCAAGATTG CCTTTGTTTC CGGCGCCAGC
CGAGGCATCG GCGAGGCCAT CGCCCACTTG CTCGCGCAGC AAGGGGCCCA TGTGATCGTT
TCCAGCCGCA AGCTTGAAGG GTGCCAGCAG GTAGCCGACG CCATCATGGC CGCCGGCGGC
AAGGCCACGG CTGTGGCCTG CCACATTGGT GAGCTGGAAC AGATTCAGCA GGTGTTCGCT
GGCATTCGCG AACAGTTCGG GCGACTGGAC GTGCTGGTCA ACAACGCCGC CACCAACCCG
CAATTCTGCA ATGTGCTGGA CACCGACCCA GGGGCGTTCC AGAAGACCGT GGACGTGAAC
ATCCGTGGTT ACTTCTTCAT GTCGGTGGAG GCTGGCAAGC TGATGCGCGA GAACGGCGGC
GGCAGCATCA TCAACGTGGC GTCAATCAAC GGTGTTTCAC CTGGGCTGTT CCAAGGCATC
TATTCGGTGA CCAAGGCGGC GGTCATTAAC ATGACCAAGG TGTTCGCCAA AGAGTGTGCA
CCCTTCGGTA TTCGCTGCAA CGCGCTACTG CCGGGGCTGA CCGACACCAA GTTCGCTTCG
GCACTGGTGA AGAACGAAGC CATCCTCAAC GCCGCCTTGC AACAGATCCC GCTCAAGCGC
GTGGCCGACC CCAAGGAAAT GGCGGGCGCG GTGCTGTACC TGGCCAGCGA TGCCTCCAGC
TACACCACCG GCACCACGCT CAATGTCGAC GGTGGCTTCC TGTCCTGA
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| Protein sequence | MSKTHLFDLD GKIAFVSGAS RGIGEAIAHL LAQQGAHVIV SSRKLEGCQQ VADAIMAAGG
KATAVACHIG ELEQIQQVFA GIREQFGRLD VLVNNAATNP QFCNVLDTDP GAFQKTVDVN
IRGYFFMSVE AGKLMRENGG GSIINVASIN GVSPGLFQGI YSVTKAAVIN MTKVFAKECA
PFGIRCNALL PGLTDTKFAS ALVKNEAILN AALQQIPLKR VADPKEMAGA VLYLASDASS
YTTGTTLNVD GGFLS
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