| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2071 |
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| Symbol | |
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| ID | 4278983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2455528 |
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| End bp | 2456298 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134860 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_750755 |
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| Protein GI | 114563242 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATG TCAATTTGTT TGATTTAACA GGGAAGGTTG CCTTAGTGAC TGGTGCAAGC
CGTGGTATTG GCGAAAGTGT TGCCAAAGTA TTAGCTCAGT ATGGCGCCCA TGTCATTGTA
TCAAGTCGAA AAATCGAAGC ATGCCAGATA GTGGTTGATG ATATTATTAA AGCCGGCGGC
AGTGCACAAG CTATTGCGTG TCACATTGGC GACATGGATC AAATAGAGTC GATTTTCGCC
GCCATTACAG AGCAACATGG CAAACTAGAT ATTCTGGTCA ATAACGCTGC TGCTAACCCA
TATTTTGGTC ACATTATTGA TACTGACTTA ATCGCCTTTC AAAAAACCGT TGACGTTAAC
ATTCGTGGTT ACTTTTTTAT GTCGACCAAA GGCGCAAAAT TAATGAAAGA CAGTGGCGGT
GGTTCAATCA TTAATGTCGC GTCTGTTAAT GGCGTCATCC CAGGCGACTT CCAAGGTATT
TACTCTATTA CTAAAGCGGC TGTTATTTCA ATGACACAAG CATTCGCCAA AGAATGTGCC
CAATTCAATA TCCGCGTGAA TGCTCTATTA CCCGGCGGAA CAGATACCAA GTTTGCTTCT
GCGTTAGTTG ATAACCCAGC CATTTTGAAA CAAATGATGT ACCACGTACC AATGAAGCGT
GTGGCTCAGC CAGATGAAAT GGCCGGCACA GTGTTGTATC TCGCCTCAAA CGCATCAAGC
TACACCACGG GTACGGCTAT TAATGTTGAT GGTGGCTATT TGATTGGCTA A
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| Protein sequence | MNNVNLFDLT GKVALVTGAS RGIGESVAKV LAQYGAHVIV SSRKIEACQI VVDDIIKAGG
SAQAIACHIG DMDQIESIFA AITEQHGKLD ILVNNAAANP YFGHIIDTDL IAFQKTVDVN
IRGYFFMSTK GAKLMKDSGG GSIINVASVN GVIPGDFQGI YSITKAAVIS MTQAFAKECA
QFNIRVNALL PGGTDTKFAS ALVDNPAILK QMMYHVPMKR VAQPDEMAGT VLYLASNASS
YTTGTAINVD GGYLIG
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