| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3655 |
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| Symbol | |
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| ID | 5199448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4017203 |
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| End bp | 4017991 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583210 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001264139 |
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| Protein GI | 148556557 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.381392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCT CCGGCAAGAC CGTGATGATT TCAGGGGTGG GACCGGGCAT GGGCCGCAAG
CTCGCCCTGC TCGCCGCCGC CGAGGGGGCG AGGGTGGCGA TCGGATCGCT GCCCTCCGAA
CAGGCGTTCA TCGACGGCGT CGCCGCCGAG GTGAAGGCGG CGGGCGGCGA ATGCATCGCG
GTCGGCTGCG ACGTCACCGA CCAGGCGCAG TGCCACGCCT TCGCCGCCGC GACGATCGAG
GCGTTCGGCA CGATCGACGG CCTCGTCAAC AGCGCCTATG TCCATGGCGG CTGGGACCTG
TTCGAGGATG CCGACCTCGA CGTCTGGCGC CGCGCCTTCG AGGTGACCTT CTGGGGCGCG
CTGCACATGA CCAAGGCGGT GCTGCCCGAG ATGAAGCGCC GCCGCGCCGG CGCGGTCGTC
AACATCTCGA CCCAGGGCAC CGTCCGCGCG CTGCCGCGCC AGGGCGACTA TGCCTGCGCC
AAGGCCGCGC TCAACGCCGC GACCCGCACT TGCGCGCGCG AGCTGGGCGA ATATGGCATC
CGCTTCGTCG CCACGCGCAT GGGCCGCCTC TGGGGCGTTC CCTATCAGGT CGCGATGGCC
GAGCGGGCGA AGCAGCAGGG GATCACCCTC GACCAGCTTC TCGACGGCGT CCGCGCCGGC
ATCGCGCTGG GCGTCATCCC GCCCGACGAG GAATGCGCCA AGGGGGTCGT CATGTTCCTG
TCCGACTATG CGTCGATGAT CACTGGCGCC GGCATCGACA TCAATGGCGG CGAGTATATG
TCGCCGTGA
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| Protein sequence | MILSGKTVMI SGVGPGMGRK LALLAAAEGA RVAIGSLPSE QAFIDGVAAE VKAAGGECIA
VGCDVTDQAQ CHAFAAATIE AFGTIDGLVN SAYVHGGWDL FEDADLDVWR RAFEVTFWGA
LHMTKAVLPE MKRRRAGAVV NISTQGTVRA LPRQGDYACA KAALNAATRT CARELGEYGI
RFVATRMGRL WGVPYQVAMA ERAKQQGITL DQLLDGVRAG IALGVIPPDE ECAKGVVMFL
SDYASMITGA GIDINGGEYM SP
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