| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4104 |
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| Symbol | |
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| ID | 4695013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4502613 |
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| End bp | 4503380 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639851851 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_998827 |
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| Protein GI | 121611020 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR03206] 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.90531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCAT TGGACGGCAA GACCATCATC GTGACAGGCG GCGGCGGCGG CATCGGCGGT
GCCACCTGCC GGCGTCTGGC GCAAGATGGC GCCCAGGTGG CGGTGTTTGA CATGGACCTG
CAGGCCGCCC AAAAAGTGGC GCATGCCATC CAGGGCGCGG GCGGAGCCGC CGTTGCGTTC
CAGTGCGACA TCACCGACCG CGCCCGGGTG GACAGCGCCG TCGCCGCCAC GATCGCCCGA
TGGGGCCGCA TCGACGTGCT GGTGAACAAC GCCGGCTGGG ACATATTCAA GCCCTTCACC
AGGACGGTGC CCGCCGAGTG GGAGCGACTG ATTGCCATCA ACCTGACCGG CGCGCTGCAC
ATGCACCATG CGGTGTTGCC CGGCATGGTG CAGCGCAGAG CCGGCCGCAT CGTCAACATC
GCGTCCGATG CGGCGCGTGG CGGCTCCTCC GGCGAGGCCG TCTACTCCGC CTGCAAGGGC
GCTCTGGTGG CACTGTCCAA GACCCTGGCC CGCGAACATG CCCGCCAAGG CATCACGGTC
AACGTGGTCT GCCCCGGCCC GACCGACACC GCCCTGCTGA CGGGCATGGC CGAAGGCGCC
CGCGACCCGG CCAAGCTCAT CGAGGCTTTC AAAAGCGCCA TTCCGCTCGG ACGCCTGGGT
CGGCCCGAAG ACCTGGCCGG CGCCATTGCC TTTTTTGCCA GCGACGACGC CAGCTTCATC
ACGGGCCAGG TCCTCAGCGT CTCCGGCGGC CTGACCATGC ACGGCTGA
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| Protein sequence | MAPLDGKTII VTGGGGGIGG ATCRRLAQDG AQVAVFDMDL QAAQKVAHAI QGAGGAAVAF
QCDITDRARV DSAVAATIAR WGRIDVLVNN AGWDIFKPFT RTVPAEWERL IAINLTGALH
MHHAVLPGMV QRRAGRIVNI ASDAARGGSS GEAVYSACKG ALVALSKTLA REHARQGITV
NVVCPGPTDT ALLTGMAEGA RDPAKLIEAF KSAIPLGRLG RPEDLAGAIA FFASDDASFI
TGQVLSVSGG LTMHG
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