Gene Saro_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3736 
Symbol 
ID5077884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp373133 
End bp373912 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID640481459 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001166121 
Protein GI146275961 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAAG ACAAGGTCGT CATCGTCACC GGGATCGGTC CTGGTCTTGG TCGCACGATA 
GCGACCGAGG CGGCGAAAAT GGGCGCCGAC GTTGCGATGG TGTCGCGCTC GGGCGGGATC
ATGGACGAGG TGGCGGCGGA CATCGCCGCT GCGGGGCGGC GAGCGCTCAC CATCCGCGCC
GACATTACAT CTGACGCGGA CTGTGCCCGG GTGGCGCAGG AAACCGTGGC CGCGTTCGGA
CGCATCGACG GGCTCGTCAA CAGTGCCTAC TTCCCCGGTC GCCTCGCCCC GGTACTCGAT
CTCGACCTCG ATGCGCTCGG CCGTGCGTTC GAGGTGACCG TCATGGGCAC TATCCGCATG
ATCCGTGCAG TCGTGCCGCA GATGGAGAAG CAGGGAGGCG GCTCCGTCGT CAACGTGGGC
AGCCAGGTGG CGCGCAAGGT CGTCCCGCAG CAGGGCGGGT ACGCCGCGAC CAAGGCGGCA
CAGGCTTCGC TCACCCGCTA TCTTGCGGCT GAACTGGGTT CGAAGGGCAT CCGTTTCAAC
ACACCGGCCA TCGGCTGGAC GATGAGCGCG CCGGCCCGCG CCTGGTTGGA GAGCGAGGCG
GAAAAGGGCG GGCCAAGCTT CGAGGAAGCC GAAGCGGCGA TCTCGGCGAC GATGGCGCTT
GGCCGGGTGC CGAGCGATGA GGAGTGTGCG CGAGGCATCC TCGTTTTCCT CTCGGATGCG
CTGTCCTCGG TGACCGGCGC GACGCTCGAT ATCAACGCGG GGGACTACAT GCCGCTCTAG
 
Protein sequence
MLEDKVVIVT GIGPGLGRTI ATEAAKMGAD VAMVSRSGGI MDEVAADIAA AGRRALTIRA 
DITSDADCAR VAQETVAAFG RIDGLVNSAY FPGRLAPVLD LDLDALGRAF EVTVMGTIRM
IRAVVPQMEK QGGGSVVNVG SQVARKVVPQ QGGYAATKAA QASLTRYLAA ELGSKGIRFN
TPAIGWTMSA PARAWLESEA EKGGPSFEEA EAAISATMAL GRVPSDEECA RGILVFLSDA
LSSVTGATLD INAGDYMPL