| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3560 |
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| Symbol | |
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| ID | 5871351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3960189 |
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| End bp | 3960956 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548681 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001669787 |
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| Protein GI | 167034556 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.457145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.310407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAA CCCACCTGTT CGACCTCGAC GGCAAGATTG CTTTTGTTTC CGGCGCCAGC
CGAGGCATCG GCGAGGCCAT CGCCCACTTG CTGGCGCAGC AAGGGGCCCA CGTGATCGTT
TCCAGTCGCA AGCTCGACGG TTGCCAACAG GTGGCCGACG CCATCATCGC CGCCGGCGGC
AAGGCCACGG CAGTGGCCTG CCACATTGGT GAACTGGAGC AGATCCAGCA GGTGTTCGCC
GGCATTCGCG AACAGTTCGG GCGCCTGGAC GTGCTGGTCA ACAACGCCGC CACCAACCCG
CAGTTCTGTA ACGTGCTGGA CACCGACCCA GGAGCGTTCC AGAAGACCGT GGACGTGAAC
ATCCGTGGTT ACTTCTTCAT GTCGGTGGAG GCCGGCAAGC TGATGCGCGA GAACGGCGGC
GGCAGCATCA TCAACGTGGC GTCGATCAAC GGGGTTTCGC CTGGGCTTTT CCAGGGTATC
TATTCGGTGA CCAAGGCGGC AGTCATCAAC ATGACCAAGG TGTTCGCCAA AGAATGCGCG
CCGTTCGGCA TTCGCTGCAA CGCCCTGCTG CCTGGCCTGA CCGATACCAA GTTCGCTTCG
GCACTGGTGA AGAACGACGC CATCCTCAAT GCCGCCTTGC AGCAGATCCC GCTCAAGCGC
GTGGCCGACC CCAAGGAAAT GGCCGGCGCA GTGCTGTACT TGGCCAGCGA TGCCTCCAGC
TACACCACCG GTACCGCGCT CAATGTCGAC GGTGGCTTCC TGTCCTGA
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| Protein sequence | MSKTHLFDLD GKIAFVSGAS RGIGEAIAHL LAQQGAHVIV SSRKLDGCQQ VADAIIAAGG
KATAVACHIG ELEQIQQVFA GIREQFGRLD VLVNNAATNP QFCNVLDTDP GAFQKTVDVN
IRGYFFMSVE AGKLMRENGG GSIINVASIN GVSPGLFQGI YSVTKAAVIN MTKVFAKECA
PFGIRCNALL PGLTDTKFAS ALVKNDAILN AALQQIPLKR VADPKEMAGA VLYLASDASS
YTTGTALNVD GGFLS
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