| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3639 |
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| Symbol | |
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| ID | 5196403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3997531 |
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| End bp | 3998310 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583194 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001264123 |
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| Protein GI | 148556541 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.670645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTGA AGGACAAGGT CGTGATCATC ACCGGGGTCG GCCCGGGGAT GGGATGCAAG
ATGGCGACGA TCGCCGCCGC CGAGGGCGCC AGCGTGGTGA TGAGCGCGCG GTCCGCCGCC
TTCATCGACG GCGTCGCGGC GGAGATCGTG GCGGCGGGCG GACGGGCGAT CGCTGTGCCC
AGCGATGTCA CCCGGATCGA GGACTGCGAC CGCGTCGCGC AGGCGGCGAT CGACGCCTAT
GGCCGGATCG ACGGGTTGGT GAACAGCGCC TTCCGCTTCG TCGGCGGGCT GCCCTTCGGG
CGCGAGACGC TGCCCGAATG GCAGGCGTCG CTCGACGTCG CCCTGTTCGG CACGCTCAAG
ATGATCGATG CGGTGGTCCC GCACATGAAG GCGCGGCGCG AGGGATCGAT CGTCAACGTC
AGCACCCGAT CGACGATGCA GCCGCTCGCG GGCGAGGGCC CCTATGTCGC TGCCAAGACC
GCGCTGCTCG GCGTCAGCCG CCAGCTCGCG ATGGAGTTCG GTCCCTATAA TATCCGGGTC
AATTCGCCGC GCATGGGCTG GCTGTGGGGC GATCCGGTGC GCGGCTACCT GACCGCCAAG
GCGGAGAAGC GCGGCGTTCC GCTCGACGAG GTCGTCGCCG AGATCGTCCG CGACATCCCG
CTCGGCGTGA TCCCGCCCGA TGAGGAATGC GCCCGGTCGG TGCTGTTCTT CCTGTCCGAC
CATGCCCGGA TGGTGACGGG CACCTCGCTC GACATCAACG GCGGCCAGTT CATGATGTAG
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| Protein sequence | MLLKDKVVII TGVGPGMGCK MATIAAAEGA SVVMSARSAA FIDGVAAEIV AAGGRAIAVP
SDVTRIEDCD RVAQAAIDAY GRIDGLVNSA FRFVGGLPFG RETLPEWQAS LDVALFGTLK
MIDAVVPHMK ARREGSIVNV STRSTMQPLA GEGPYVAAKT ALLGVSRQLA MEFGPYNIRV
NSPRMGWLWG DPVRGYLTAK AEKRGVPLDE VVAEIVRDIP LGVIPPDEEC ARSVLFFLSD
HARMVTGTSL DINGGQFMM
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