Gene Psyc_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1871 
Symbol 
ID3515840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2302590 
End bp2303381 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID637670568 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_265153 
Protein GI71066426 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAA CTGTTATTCC GGCACTTCTT ACTGATAAAG TCGCCATTGT CACAGGCGCA 
AGTCGTGGTC TCGGCGCGAA AATTGCTGCA CAGCTGGCAG CAGCAGGTGC GAGCGTTTGC
GTTAATTATT TGAATAGTAA AGAGGCGGCT GAAAAAGTGG TTGCTGATAT CAAAGCAGCA
GGTGGGCAAG CGTTTGCCTA TCAAGGGGAT GTGACTGATT TAGCGCAAAT GCAAGCAATG
GCAGCAGCAG TTATAGAGCG TTTCGGACGT ATCGATATAT TGGTTAACAA TGCTTTACCG
AGCTATCAAT TTAATCCGAG CGCTGATTAC ACCAGTATTG AGACCGTTAA ATGGGCACAT
TTTTCCCAGC AAATTGACGG CATTGTTCAA GGCGCAGTCA ATACGGTACA AGCGGTATTG
CCACAAATGA AAACTCAGCA GATGGGTAAG ATTATCAATA TTTCAACCAA TCTGGTTTAT
AATCCGGTGG TCACTTATTA TGACTATACT ACCGCAAAAT CTGCACTCAT TGGTCTGACA
CGCAATTTAG CGGCGGAGCT GGGGCAATAT GGTATTCGGG TGAACTTATT GGCAGGTGGA
CTACTCAAAA CGACTGACGC TAGTAAATTA ACGACCGAAG AAGTCTTTGA TTATATCGCC
ACGACGACGC CACTGCGCCA AGCGACCTCA GTTGCCGACT TTGCCAATTC AGTATTGCTG
ATGGCATCTG ACTTAAGCTT AGCCATCACG GGTCAATCTA TTGCCGTTGA TGGCGGTCTG
ACGATGCCTT AA
 
Protein sequence
MAQTVIPALL TDKVAIVTGA SRGLGAKIAA QLAAAGASVC VNYLNSKEAA EKVVADIKAA 
GGQAFAYQGD VTDLAQMQAM AAAVIERFGR IDILVNNALP SYQFNPSADY TSIETVKWAH
FSQQIDGIVQ GAVNTVQAVL PQMKTQQMGK IINISTNLVY NPVVTYYDYT TAKSALIGLT
RNLAAELGQY GIRVNLLAGG LLKTTDASKL TTEEVFDYIA TTTPLRQATS VADFANSVLL
MASDLSLAIT GQSIAVDGGL TMP