| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4512 |
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| Symbol | |
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| ID | 4669454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5011550 |
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| End bp | 5012317 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639825700 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_972823 |
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| Protein GI | 120613145 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.588184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.748301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AGGGCCAGGT CGTTCTGGTG ACGGGCGCGA GCCGGGGCAT CGGCGCGGCC
ATCGCGCGGG CTTTCGCGCA GGAGGGCGCC ACGGTGGTGG TGAACCATTT GTCCAACGAC
GCGGCGGCGG CCGAGACGGT GGCGGCCTGC CGCGCCGCCG GCGGCGATGC CTGGGCCGCG
CGCGCCGACG TGGGCGATGC CGATGCGGTG CGCGCCATGG TGGACGCGGT GGTGCTGGAG
GCCGGCCGCA TCGACGTGGT GGTCAACAAC GCTTTCCGGC CCTATGCCTT CGATGCACGG
CGCCGCGCGC TGTTCGACGG CCTGCAGTGG AGCGACTACC AGGCCCAGTT CGACGGTGCC
GTGGGCGGGG CCTTCAATGT CTGCCAGGCG GTGCTGCCGC ACCTGCGCCA GCGCGCGCGG
GGCAGCGTCG TGAACATCGC CACCAACCTG GTGGAGCATC CGGTGGTGCC GTACCACGAC
TACACCACGG CCAAGGCCGC GCTGGTGGCC TTCAGCCGCA ACCTGGCGGC CGAGCTGGGG
CCCGTGGGCA TCCGCGTCAA TTGCGTGGCG CCGGGGCTGG TCTATCCCAC GCAGGCGAGC
CGATCCACGC CCGAGGCGCT GCGCGACGCG ATCACCGCCG CCACGCCGCT GCGGCGCATC
GCCCGGCCCG AGGATGTGGC GGGGCCGGTG CTGTTCCTGG CCTCGGAGTG GAGCAGCTTC
ATGACCGGGC AGGTGCTGTT CGTCGATGGC GGGCTGGTGA TGAAGTGA
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| Protein sequence | MKFKGQVVLV TGASRGIGAA IARAFAQEGA TVVVNHLSND AAAAETVAAC RAAGGDAWAA
RADVGDADAV RAMVDAVVLE AGRIDVVVNN AFRPYAFDAR RRALFDGLQW SDYQAQFDGA
VGGAFNVCQA VLPHLRQRAR GSVVNIATNL VEHPVVPYHD YTTAKAALVA FSRNLAAELG
PVGIRVNCVA PGLVYPTQAS RSTPEALRDA ITAATPLRRI ARPEDVAGPV LFLASEWSSF
MTGQVLFVDG GLVMK
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