More than 300 homologs were found in PanDaTox collection
for query gene Franean1_7149 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_7149  short-chain dehydrogenase/reductase SDR  100 
 
 
265 aa  528  1e-149  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0163274 
 
 
-
 
NC_009077  Mjls_0034  short-chain dehydrogenase/reductase SDR  47.13 
 
 
270 aa  230  2e-59  Mycobacterium sp. JLS  Bacteria  normal  normal  0.155625 
 
 
-
 
NC_008146  Mmcs_0044  short-chain dehydrogenase/reductase SDR  46.74 
 
 
270 aa  227  2e-58  Mycobacterium sp. MCS  Bacteria  normal  0.442455  n/a   
 
 
-
 
NC_008705  Mkms_0053  short-chain dehydrogenase/reductase SDR  46.74 
 
 
270 aa  227  2e-58  Mycobacterium sp. KMS  Bacteria  normal  0.0110329  normal  0.0245266 
 
 
-
 
NC_009338  Mflv_2380  short-chain dehydrogenase/reductase SDR  44.49 
 
 
271 aa  211  1e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3511  short-chain dehydrogenase/reductase SDR  47.16 
 
 
264 aa  204  1e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.531457  n/a   
 
 
-
 
NC_009077  Mjls_0285  short-chain dehydrogenase/reductase SDR  47.37 
 
 
264 aa  195  6e-49  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0294  short-chain dehydrogenase/reductase SDR  46.93 
 
 
264 aa  194  1e-48  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0304  short-chain dehydrogenase/reductase SDR  46.93 
 
 
264 aa  194  1e-48  Mycobacterium sp. KMS  Bacteria  normal  normal  0.20364 
 
 
-
 
NC_010338  Caul_1940  short-chain dehydrogenase/reductase SDR  44.09 
 
 
275 aa  193  2e-48  Caulobacter sp. K31  Bacteria  normal  0.320564  normal 
 
 
-
 
NC_009338  Mflv_4545  short-chain dehydrogenase/reductase SDR  47.39 
 
 
261 aa  191  8e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.384179 
 
 
-
 
NC_009921  Franean1_1909  short-chain dehydrogenase/reductase SDR  41.67 
 
 
256 aa  180  2e-44  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2633  short-chain dehydrogenase/reductase SDR  43.3 
 
 
276 aa  166  2.9999999999999998e-40  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.364215  normal 
 
 
-
 
NC_008009  Acid345_3576  short-chain dehydrogenase/reductase SDR  39.9 
 
 
276 aa  134  1.9999999999999998e-30  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  42.31 
 
 
268 aa  132  6e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  34.09 
 
 
260 aa  124  1e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  34.67 
 
 
261 aa  120  1.9999999999999998e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_6445  short-chain dehydrogenase/reductase SDR  38.33 
 
 
272 aa  120  1.9999999999999998e-26  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  34.22 
 
 
261 aa  119  4.9999999999999996e-26  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  35.11 
 
 
264 aa  114  2.0000000000000002e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  31.62 
 
 
271 aa  114  2.0000000000000002e-24  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  34.29 
 
 
269 aa  114  2.0000000000000002e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009664  Krad_0779  short-chain dehydrogenase/reductase SDR  43.62 
 
 
286 aa  112  4.0000000000000004e-24  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00749167  decreased coverage  0.00042824 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  31.76 
 
 
264 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  37.19 
 
 
264 aa  110  3e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  34.29 
 
 
259 aa  107  1e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  36.02 
 
 
258 aa  108  1e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  34.55 
 
 
261 aa  104  2e-21  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  34.6 
 
 
262 aa  103  3e-21  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  34.6 
 
 
262 aa  103  3e-21  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  34.6 
 
 
262 aa  103  3e-21  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  29.87 
 
 
255 aa  100  2e-20  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  37.61 
 
 
260 aa  100  2e-20  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  31.58 
 
 
261 aa  100  2e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  38.25 
 
 
291 aa  99.8  5e-20  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  31.38 
 
 
273 aa  97.1  3e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  34.38 
 
 
261 aa  96.3  5e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  34.67 
 
 
266 aa  95.1  1e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  33.76 
 
 
259 aa  94  2e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  37.13 
 
 
271 aa  94  2e-18  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  29.44 
 
 
262 aa  94  2e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  37.02 
 
 
258 aa  94  2e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  31.94 
 
 
256 aa  93.6  3e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  36.12 
 
 
259 aa  92  9e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  30.21 
 
 
264 aa  91.7  1e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_014151  Cfla_2980  short-chain dehydrogenase/reductase SDR  36.2 
 
 
271 aa  91.3  2e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  32.89 
 
 
289 aa  90.9  2e-17  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  28.02 
 
 
344 aa  90.5  3e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  36.76 
 
 
268 aa  90.5  3e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_009046  PICST_79198  beta-hydroxysteroid dehydrogenase type 3  32.35 
 
 
346 aa  90.5  3e-17  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.103283  normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  30.54 
 
 
269 aa  89  8e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  34.92 
 
 
266 aa  88.6  9e-17  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  27.11 
 
 
257 aa  88.6  1e-16  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  35.6 
 
 
266 aa  87.4  2e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  34.03 
 
 
258 aa  87.8  2e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  34.78 
 
 
268 aa  87.4  2e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  33.19 
 
 
275 aa  86.7  3e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  28.89 
 
 
298 aa  86.7  4e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  35.08 
 
 
281 aa  86.3  5e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  35.08 
 
 
266 aa  85.9  5e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  35.08 
 
 
281 aa  86.3  5e-16  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  34.55 
 
 
266 aa  85.9  6e-16  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008726  Mvan_4098  short-chain dehydrogenase/reductase SDR  34.24 
 
 
268 aa  85.9  6e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.230051  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  35.45 
 
 
262 aa  85.9  7e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  34.43 
 
 
257 aa  85.5  8e-16  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  34.06 
 
 
259 aa  85.1  9e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  33.86 
 
 
260 aa  84.7  0.000000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  35.53 
 
 
259 aa  85.1  0.000000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  31.44 
 
 
270 aa  84.7  0.000000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_011670  PHATRDRAFT_25360  short-chain dehydrogenase/reductase acting with NAD or NADP as acceptor  31.67 
 
 
327 aa  85.1  0.000000000000001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.421024  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  32.98 
 
 
258 aa  84  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2362  short chain oxidoreductase  46.6 
 
 
128 aa  84.3  0.000000000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0558565 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  35.16 
 
 
271 aa  83.6  0.000000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  32.87 
 
 
264 aa  84  0.000000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  35.16 
 
 
267 aa  82.8  0.000000000000005  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  34.55 
 
 
266 aa  82.4  0.000000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_009338  Mflv_2545  short-chain dehydrogenase/reductase SDR  33.7 
 
 
268 aa  82  0.000000000000009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.522448  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  33.33 
 
 
266 aa  82  0.00000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  32.52 
 
 
283 aa  81.3  0.00000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  33.33 
 
 
262 aa  81.6  0.00000000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  32.4 
 
 
260 aa  81.3  0.00000000000001  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  32.8 
 
 
252 aa  81.6  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  36.79 
 
 
263 aa  82  0.00000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  28.32 
 
 
257 aa  80.9  0.00000000000002  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  34.97 
 
 
260 aa  80.5  0.00000000000002  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  33.48 
 
 
271 aa  80.9  0.00000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  30.04 
 
 
259 aa  81.3  0.00000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  29.78 
 
 
263 aa  80.1  0.00000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  34.62 
 
 
266 aa  80.5  0.00000000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5585  short-chain dehydrogenase/reductase SDR  31.72 
 
 
265 aa  80.5  0.00000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.892025  normal  0.853623 
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  35.52 
 
 
253 aa  79.7  0.00000000000004  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_010338  Caul_3249  short-chain dehydrogenase/reductase SDR  32.77 
 
 
258 aa  80.1  0.00000000000004  Caulobacter sp. K31  Bacteria  normal  normal  0.559348 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  33.48 
 
 
253 aa  79.3  0.00000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  32.46 
 
 
262 aa  79.3  0.00000000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  30.89 
 
 
264 aa  79.3  0.00000000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_011671  PHATR_10213  predicted protein  33.89 
 
 
182 aa  79.3  0.00000000000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  32.81 
 
 
267 aa  79  0.00000000000007  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  34.76 
 
 
259 aa  79  0.00000000000008  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  33.52 
 
 
271 aa  79  0.00000000000008  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  35.16 
 
 
258 aa  79  0.00000000000008  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
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