More than 300 homologs were found in PanDaTox collection
for query gene Franean1_6469 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  100 
 
 
263 aa  518  1e-146  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  76.34 
 
 
291 aa  380  1e-104  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  50.58 
 
 
275 aa  243  1.9999999999999999e-63  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  50.78 
 
 
275 aa  237  1e-61  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  47.49 
 
 
264 aa  215  7e-55  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  46.74 
 
 
260 aa  210  2e-53  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  41.25 
 
 
261 aa  209  4e-53  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  43.3 
 
 
264 aa  208  6e-53  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  40.86 
 
 
261 aa  206  3e-52  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  44.15 
 
 
271 aa  201  9.999999999999999e-51  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  40.78 
 
 
258 aa  199  5e-50  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  39.69 
 
 
264 aa  199  5e-50  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  39.92 
 
 
257 aa  196  3e-49  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  42.19 
 
 
262 aa  192  3e-48  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  42.19 
 
 
262 aa  192  3e-48  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  42.8 
 
 
259 aa  192  3e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  41.8 
 
 
262 aa  189  2.9999999999999997e-47  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  44.19 
 
 
271 aa  189  5e-47  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  43.19 
 
 
269 aa  189  5e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  36.68 
 
 
260 aa  188  5.999999999999999e-47  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  38.71 
 
 
273 aa  183  3e-45  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  40.23 
 
 
263 aa  181  9.000000000000001e-45  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  40.55 
 
 
264 aa  179  2.9999999999999997e-44  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_009664  Krad_0779  short-chain dehydrogenase/reductase SDR  47.97 
 
 
286 aa  179  4e-44  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00749167  decreased coverage  0.00042824 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  40.47 
 
 
263 aa  177  2e-43  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  38.17 
 
 
269 aa  176  4e-43  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  41.56 
 
 
267 aa  171  1e-41  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  43.53 
 
 
258 aa  171  1e-41  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  36.47 
 
 
263 aa  169  6e-41  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  39.76 
 
 
262 aa  166  2.9999999999999998e-40  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  36.86 
 
 
267 aa  165  8e-40  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  40.96 
 
 
272 aa  163  2.0000000000000002e-39  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  37.9 
 
 
289 aa  162  7e-39  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  35.27 
 
 
256 aa  159  3e-38  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  39.68 
 
 
266 aa  159  3e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  34.73 
 
 
263 aa  159  4e-38  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  36.13 
 
 
255 aa  159  5e-38  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  39.29 
 
 
266 aa  158  7e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  36.64 
 
 
259 aa  157  1e-37  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  47.85 
 
 
258 aa  157  1e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  44.25 
 
 
259 aa  156  4e-37  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  37.6 
 
 
262 aa  154  1e-36  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  38.68 
 
 
257 aa  154  2e-36  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  39.48 
 
 
259 aa  151  8.999999999999999e-36  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  33.88 
 
 
258 aa  149  4e-35  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  42.64 
 
 
259 aa  149  4e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3974  short-chain dehydrogenase/reductase SDR  39.38 
 
 
264 aa  148  9e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.036497  normal  0.609933 
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  36.51 
 
 
262 aa  148  1.0000000000000001e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  40.24 
 
 
253 aa  147  1.0000000000000001e-34  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  35.74 
 
 
259 aa  147  2.0000000000000003e-34  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  35.06 
 
 
258 aa  147  2.0000000000000003e-34  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_013204  Elen_0666  short-chain dehydrogenase/reductase SDR  37.3 
 
 
343 aa  146  3e-34  Eggerthella lenta DSM 2243  Bacteria  normal  0.019294  hitchhiker  0.000464867 
 
 
-
 
NC_008255  CHU_2063  short-chain dehydrogenase  33.59 
 
 
261 aa  146  4.0000000000000006e-34  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0247773  normal  0.17766 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  32.02 
 
 
262 aa  145  6e-34  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  48.19 
 
 
265 aa  145  6e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  38.1 
 
 
267 aa  145  8.000000000000001e-34  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  36.02 
 
 
262 aa  144  2e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  40.08 
 
 
258 aa  144  2e-33  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  46.43 
 
 
266 aa  143  3e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6207  short-chain dehydrogenase/reductase SDR  37.84 
 
 
277 aa  143  4e-33  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  42.41 
 
 
252 aa  142  4e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  36.4 
 
 
257 aa  142  5e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  32.42 
 
 
256 aa  142  5e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_014151  Cfla_2980  short-chain dehydrogenase/reductase SDR  42.47 
 
 
271 aa  142  7e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  34.55 
 
 
255 aa  142  8e-33  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  40.71 
 
 
267 aa  140  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  37.19 
 
 
260 aa  141  9.999999999999999e-33  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  37.96 
 
 
260 aa  141  9.999999999999999e-33  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  40.87 
 
 
285 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  43.29 
 
 
270 aa  140  1.9999999999999998e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  34.87 
 
 
266 aa  140  1.9999999999999998e-32  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  34.89 
 
 
266 aa  140  1.9999999999999998e-32  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  38.56 
 
 
255 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  30.04 
 
 
257 aa  140  1.9999999999999998e-32  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  40.91 
 
 
253 aa  139  3e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  39.73 
 
 
264 aa  140  3e-32  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  37.97 
 
 
264 aa  139  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  40.64 
 
 
263 aa  139  4.999999999999999e-32  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  35.83 
 
 
321 aa  139  4.999999999999999e-32  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  30.42 
 
 
257 aa  139  4.999999999999999e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1378  hypothetical protein  32.35 
 
 
259 aa  139  6e-32  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_0310  short-chain dehydrogenase/reductase SDR  37.93 
 
 
284 aa  138  7.999999999999999e-32  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  36.32 
 
 
266 aa  138  8.999999999999999e-32  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_006368  lpp1382  hypothetical protein  32.35 
 
 
259 aa  137  1e-31  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  41.5 
 
 
276 aa  137  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  43.26 
 
 
268 aa  137  1e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  40.69 
 
 
266 aa  138  1e-31  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  41.36 
 
 
262 aa  137  1e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  37.24 
 
 
267 aa  137  2e-31  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  40.27 
 
 
266 aa  137  2e-31  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  35.65 
 
 
263 aa  137  2e-31  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  34.23 
 
 
258 aa  136  3.0000000000000003e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3249  short-chain dehydrogenase/reductase SDR  41.43 
 
 
258 aa  136  3.0000000000000003e-31  Caulobacter sp. K31  Bacteria  normal  normal  0.559348 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  38.46 
 
 
267 aa  136  3.0000000000000003e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  35.5 
 
 
266 aa  136  3.0000000000000003e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1475  short-chain dehydrogenase/reductase SDR  40.5 
 
 
269 aa  137  3.0000000000000003e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  38.46 
 
 
267 aa  136  3.0000000000000003e-31  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_010571  Oter_2643  short-chain dehydrogenase/reductase SDR  37.02 
 
 
272 aa  136  4e-31  Opitutus terrae PB90-1  Bacteria  normal  0.240814  normal 
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  38.58 
 
 
292 aa  136  4e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  40.64 
 
 
262 aa  136  4e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
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