Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0689 |
Symbol | |
ID | 4021160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 774216 |
End bp | 774995 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960877 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_567828 |
Protein GI | 91975169 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGAAC GCGTGACATT GATTACGGGG GCATCGGCGG GAATCGGTGC GGAGCTGGCG CGTATTTTTG CGGCAAATGC TCACAGAGTA GCCTTGGTGG CGCGCCGCGC CGACCGGCTC GAAGCGCTGG CGGCCGAAAT CATCGCCAAA GGCGGGCCGG AGCCGATTAT TATCGCCTGC GATCTCGGCA AGCCCGAAGG CGCCGACGAA ATCGTCGCCC GGCTGGCCGC GGCCGGGGTC GAGGTCGAAT ATCTGGTCAA CAATGCCGGC TATGGATTGT TCGGCCGCGC CGCCGAGATC GACCGGGCTG ATCAGCTCGG CATCATCGAT CTCAACATCC GTGCGCTGAC CGATCTGTCG TTGCGCTTCG CCGACAGCGT CACCCGGCTG CGCGGCGGCA TCCTCAACGT CGCCTCGATC GCCGGATTCA TGCCTGGGCC GGGAATGGCG GTGTATTACG CGTCCAAGGC CTATGTGCTG TCGCTGAGCG AGGCGCTGCA TCAGGAACTC GGCAAGAAGG GCGTCCGGGT CACGGCGATC TGCCCGGGAC CGGTGCCGAC CGAGTTCCAG TTGCGCGCCA GTATCGAACC CGGGATCGAT TCGGCGATCC TCAACGTGTC GCCGGCCGAA GTCGCCCGCC AGGGCTATCA GGGGCTGATG AACAACAAGC GGCTGGTGCT GCCCGGGGTG GGCGTCAAGA TCGTGCCGTT CCTGCTGCGG TTCTTCCCGC GCGGCTTCGT GCTCGCCGCG GTCGGCGGTT TCCAGCAACG CCAACGCTGA
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Protein sequence | MTERVTLITG ASAGIGAELA RIFAANAHRV ALVARRADRL EALAAEIIAK GGPEPIIIAC DLGKPEGADE IVARLAAAGV EVEYLVNNAG YGLFGRAAEI DRADQLGIID LNIRALTDLS LRFADSVTRL RGGILNVASI AGFMPGPGMA VYYASKAYVL SLSEALHQEL GKKGVRVTAI CPGPVPTEFQ LRASIEPGID SAILNVSPAE VARQGYQGLM NNKRLVLPGV GVKIVPFLLR FFPRGFVLAA VGGFQQRQR
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