Gene RPD_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0689 
Symbol 
ID4021160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp774216 
End bp774995 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID637960877 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_567828 
Protein GI91975169 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAC GCGTGACATT GATTACGGGG GCATCGGCGG GAATCGGTGC GGAGCTGGCG 
CGTATTTTTG CGGCAAATGC TCACAGAGTA GCCTTGGTGG CGCGCCGCGC CGACCGGCTC
GAAGCGCTGG CGGCCGAAAT CATCGCCAAA GGCGGGCCGG AGCCGATTAT TATCGCCTGC
GATCTCGGCA AGCCCGAAGG CGCCGACGAA ATCGTCGCCC GGCTGGCCGC GGCCGGGGTC
GAGGTCGAAT ATCTGGTCAA CAATGCCGGC TATGGATTGT TCGGCCGCGC CGCCGAGATC
GACCGGGCTG ATCAGCTCGG CATCATCGAT CTCAACATCC GTGCGCTGAC CGATCTGTCG
TTGCGCTTCG CCGACAGCGT CACCCGGCTG CGCGGCGGCA TCCTCAACGT CGCCTCGATC
GCCGGATTCA TGCCTGGGCC GGGAATGGCG GTGTATTACG CGTCCAAGGC CTATGTGCTG
TCGCTGAGCG AGGCGCTGCA TCAGGAACTC GGCAAGAAGG GCGTCCGGGT CACGGCGATC
TGCCCGGGAC CGGTGCCGAC CGAGTTCCAG TTGCGCGCCA GTATCGAACC CGGGATCGAT
TCGGCGATCC TCAACGTGTC GCCGGCCGAA GTCGCCCGCC AGGGCTATCA GGGGCTGATG
AACAACAAGC GGCTGGTGCT GCCCGGGGTG GGCGTCAAGA TCGTGCCGTT CCTGCTGCGG
TTCTTCCCGC GCGGCTTCGT GCTCGCCGCG GTCGGCGGTT TCCAGCAACG CCAACGCTGA
 
Protein sequence
MTERVTLITG ASAGIGAELA RIFAANAHRV ALVARRADRL EALAAEIIAK GGPEPIIIAC 
DLGKPEGADE IVARLAAAGV EVEYLVNNAG YGLFGRAAEI DRADQLGIID LNIRALTDLS
LRFADSVTRL RGGILNVASI AGFMPGPGMA VYYASKAYVL SLSEALHQEL GKKGVRVTAI
CPGPVPTEFQ LRASIEPGID SAILNVSPAE VARQGYQGLM NNKRLVLPGV GVKIVPFLLR
FFPRGFVLAA VGGFQQRQR