| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4948 |
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| Symbol | |
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| ID | 5706498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5616368 |
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| End bp | 5617129 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641274343 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001539685 |
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| Protein GI | 159040432 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.623441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGGTC CTCCCCTGGC CGTCGTGACC GGCGCCTCGT CCGGTATCGG CGCGGAATTC
ACCCAGCGGC TTCTTGACCG CGGATATCGG GTGCTCGCCG TAGCCCGGCG AGCTGACCGG
CTGGTCGCGC TGGAGGAGTC CACCGGTGGC CGGGTCATCG CGGAGCCGTG CGACCTCACC
GTCGACGGCG CGACCGACGC GGTGGCCAAG CGTGCCGAGG AACTCGGCGG CGCTGACCTG
CTCGTCTGCA ACGCTGGCCG CGGTCTGCAC GGCCGGTTCG TCGACACCGA GCGGTGCGAC
ACTCTCGCCA TGCTGCAGCT GAACGTGCTG TCGAGTGTGG ATCTGGCTGC ACGGATCGTG
CCGACGATGG TGCGACGTGG ATCCGGCGGC GTGATCGTCG TCGCGTCGAC GCTGGGCTTC
GTCTCGGTGC CCAACCTGGC GGCCTACGGA GCCAGCAAGG CCTTCCTGCT GTCGTTCGCC
GAGGCGCTGT CCACCGAACT CAAGGGCACC GGCGTCAGGG CGATGGCCTT GTGTCCCGGG
CCGACCATTT CCGAGTTCAG TGAGGTGGCC GGGCTCGACG GCCAGGTCGA GAAGACTCCC
GGACACACCA CCACCGCCGA GGTGGTGAGC GGAGCTCTGC GGGCGTGGGA TGCCGGGCGC
GTGACAACTG TGCCCGGCAC GATCACCCGG CTGATGACCG GGGCCCTGGC CTACGCTCCC
CGCTCGGTCG GACGGATGGT GATGGAGCGC GTGTTCCGCT GA
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| Protein sequence | MSGPPLAVVT GASSGIGAEF TQRLLDRGYR VLAVARRADR LVALEESTGG RVIAEPCDLT
VDGATDAVAK RAEELGGADL LVCNAGRGLH GRFVDTERCD TLAMLQLNVL SSVDLAARIV
PTMVRRGSGG VIVVASTLGF VSVPNLAAYG ASKAFLLSFA EALSTELKGT GVRAMALCPG
PTISEFSEVA GLDGQVEKTP GHTTTAEVVS GALRAWDAGR VTTVPGTITR LMTGALAYAP
RSVGRMVMER VFR
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