| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5585 |
|---|
| Symbol | |
|---|
| ID | 8229200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6710328 |
|---|
| End bp | 6711125 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644933431 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003089940 |
|---|
| Protein GI | 255039319 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.892025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.853623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA AAGGAAAATA TGTCCTGATT ACCGGCGCTA CAAGCGGAAT CGGGCTTGAA
CTGGCTAAAC TGTTTGCAAA AGACGGCTTT AACCTGATCA TCACAGCACG CGACATTGCC
GAACTGGACG AAACCAGCAC GCTGCTGCGC GCCGAAGGCG TGGAAGTGTG GCCCATTGCC
AAAGATCTTT TCGATCGTGA GCAGGCATTC GGGCTTTATG CGGACATCAA ACAGAAAGGA
ATTGAGGTAG AAATCCTCGT CAATAATGCC GGCCAGGGCG TGTATGGGCA GTTCGATCAA
ACGGACATCG ACCGCGAACT GCGGATCATC GACCTCAATA TCGCATCGCT GGTTGTGCTC
ACCAAATGTT TCCTGACCGA CATGGTGGAG CGTGGTTCCG GCCGCATTCT AAACCTGGCG
TCGATCGCCA GCAAGATGCC GGGCCCCTGG CAGGCCGTGT ACCACGGTAC AAAAGCATTC
GTGCTGTCGT TCAGTGAAGC CGTGCGGGAA GAAACCAAAG ACACCGGCGT AACCATCACG
GCGCTCCTGC CGGGCGTAAC CGACACCGAC TTCTTCAACA AAGCAGATAT GCAAGCCAGC
AAGGCGGTGC AGGATGAGGA CGACAAGGCC GACCCAACCG ACGTGGCACG CGACGGCTAC
GAAGCCCTGA TGGCCGGTAA AGACCGGGTG GTTTCGGGAT TGAAAAATAA AATACAGGTA
GCTATGAGCT CAGTCTTGCC GGACGACGTG CTGGCGCACC AGATGAACGA GCAGCAGAGA
CCTGTTCACG AGAAATAA
|
|---|
| Protein sequence | MENKGKYVLI TGATSGIGLE LAKLFAKDGF NLIITARDIA ELDETSTLLR AEGVEVWPIA
KDLFDREQAF GLYADIKQKG IEVEILVNNA GQGVYGQFDQ TDIDRELRII DLNIASLVVL
TKCFLTDMVE RGSGRILNLA SIASKMPGPW QAVYHGTKAF VLSFSEAVRE ETKDTGVTIT
ALLPGVTDTD FFNKADMQAS KAVQDEDDKA DPTDVARDGY EALMAGKDRV VSGLKNKIQV
AMSSVLPDDV LAHQMNEQQR PVHEK
|
|---|
| |