More than 300 homologs were found in PanDaTox collection
for query gene Sare_4948 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  100 
 
 
253 aa  498  1e-140  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  41.18 
 
 
261 aa  166  2.9999999999999998e-40  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  44.71 
 
 
259 aa  165  5e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  40.78 
 
 
261 aa  163  2.0000000000000002e-39  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  40.71 
 
 
269 aa  161  7e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  43.08 
 
 
292 aa  160  1e-38  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  40.71 
 
 
262 aa  159  5e-38  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_011891  A2cp1_3990  short-chain dehydrogenase/reductase SDR  42.29 
 
 
266 aa  158  9e-38  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3974  short-chain dehydrogenase/reductase SDR  40.73 
 
 
264 aa  157  2e-37  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.036497  normal  0.609933 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  40.32 
 
 
262 aa  156  2e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  40.32 
 
 
262 aa  156  2e-37  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3912  short-chain dehydrogenase/reductase SDR  41.9 
 
 
266 aa  155  6e-37  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  43.15 
 
 
267 aa  152  5.9999999999999996e-36  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  43.15 
 
 
267 aa  152  5.9999999999999996e-36  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  43.44 
 
 
267 aa  151  1e-35  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  40.94 
 
 
271 aa  149  6e-35  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  42.75 
 
 
264 aa  148  9e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  39.83 
 
 
263 aa  146  3e-34  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  35.8 
 
 
260 aa  143  3e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  40.48 
 
 
291 aa  143  3e-33  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  34.4 
 
 
256 aa  139  3e-32  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  36.78 
 
 
258 aa  139  3.9999999999999997e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  35.83 
 
 
261 aa  139  4.999999999999999e-32  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  40.61 
 
 
271 aa  139  4.999999999999999e-32  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  33.07 
 
 
255 aa  139  4.999999999999999e-32  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0055  short-chain dehydrogenase/reductase SDR  36.36 
 
 
259 aa  139  6e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0606  short-chain dehydrogenase/reductase SDR  37.45 
 
 
256 aa  137  1e-31  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  33.74 
 
 
263 aa  137  2e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  37.66 
 
 
259 aa  137  2e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  39.83 
 
 
263 aa  136  3.0000000000000003e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  39.82 
 
 
256 aa  136  3.0000000000000003e-31  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  35.83 
 
 
259 aa  136  3.0000000000000003e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  37.45 
 
 
267 aa  136  3.0000000000000003e-31  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  35.69 
 
 
264 aa  135  7.000000000000001e-31  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  37.21 
 
 
258 aa  134  9.999999999999999e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  36.82 
 
 
259 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  39.04 
 
 
264 aa  133  3e-30  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  37.3 
 
 
275 aa  133  3e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  38.43 
 
 
258 aa  133  3e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  39 
 
 
269 aa  133  3e-30  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  36.4 
 
 
259 aa  132  3.9999999999999996e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_014158  Tpau_0582  short-chain dehydrogenase/reductase SDR  36.33 
 
 
266 aa  132  6e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  35.25 
 
 
273 aa  130  1.0000000000000001e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  28.63 
 
 
257 aa  130  1.0000000000000001e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  38.43 
 
 
250 aa  130  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_011884  Cyan7425_0445  short-chain dehydrogenase/reductase SDR  35.98 
 
 
267 aa  130  3e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.810235  normal  0.221701 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  35.02 
 
 
266 aa  130  3e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  34.75 
 
 
264 aa  129  3e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  28.63 
 
 
257 aa  129  4.0000000000000003e-29  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  34.4 
 
 
261 aa  129  5.0000000000000004e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  38.8 
 
 
276 aa  129  6e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  34.77 
 
 
262 aa  128  9.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  30.2 
 
 
265 aa  127  1.0000000000000001e-28  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  32.67 
 
 
258 aa  127  2.0000000000000002e-28  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  29.8 
 
 
265 aa  127  2.0000000000000002e-28  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  37.7 
 
 
275 aa  127  2.0000000000000002e-28  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  38.43 
 
 
259 aa  127  2.0000000000000002e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  33.86 
 
 
261 aa  126  3e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_010571  Oter_2643  short-chain dehydrogenase/reductase SDR  37.7 
 
 
272 aa  126  3e-28  Opitutus terrae PB90-1  Bacteria  normal  0.240814  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  33.47 
 
 
267 aa  126  3e-28  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  37.14 
 
 
273 aa  126  3e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  35.71 
 
 
277 aa  126  4.0000000000000003e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  35.4 
 
 
266 aa  125  5e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  41.2 
 
 
260 aa  124  1e-27  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  31.78 
 
 
258 aa  124  1e-27  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  35.86 
 
 
257 aa  124  2e-27  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  35.02 
 
 
266 aa  123  3e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  36.51 
 
 
269 aa  123  4e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  38.75 
 
 
272 aa  122  4e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  34.9 
 
 
252 aa  122  4e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  34.67 
 
 
257 aa  122  7e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  33.46 
 
 
264 aa  121  8e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  38.03 
 
 
263 aa  121  9e-27  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  37.78 
 
 
266 aa  121  9.999999999999999e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  36.68 
 
 
266 aa  121  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  37.78 
 
 
281 aa  121  9.999999999999999e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  37.78 
 
 
281 aa  121  9.999999999999999e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  33.46 
 
 
269 aa  121  9.999999999999999e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  35.92 
 
 
262 aa  121  9.999999999999999e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  35.53 
 
 
266 aa  120  1.9999999999999998e-26  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  40.87 
 
 
265 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  34.65 
 
 
268 aa  119  3e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  34.78 
 
 
266 aa  120  3e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  33.33 
 
 
262 aa  119  4.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  35.92 
 
 
259 aa  118  7e-26  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  41.58 
 
 
266 aa  118  7e-26  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_014151  Cfla_2980  short-chain dehydrogenase/reductase SDR  43.98 
 
 
271 aa  118  9e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  36.16 
 
 
257 aa  118  9.999999999999999e-26  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  35.37 
 
 
266 aa  117  9.999999999999999e-26  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  39.91 
 
 
258 aa  117  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  31.1 
 
 
262 aa  117  1.9999999999999998e-25  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  33.61 
 
 
259 aa  117  1.9999999999999998e-25  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  35.53 
 
 
266 aa  115  5e-25  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  35.5 
 
 
265 aa  115  5e-25  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  34.96 
 
 
266 aa  115  6e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_009664  Krad_0779  short-chain dehydrogenase/reductase SDR  39.11 
 
 
286 aa  115  6e-25  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00749167  decreased coverage  0.00042824 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  36 
 
 
266 aa  115  6.9999999999999995e-25  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  36.47 
 
 
250 aa  115  7.999999999999999e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  36 
 
 
266 aa  115  7.999999999999999e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  35.22 
 
 
255 aa  114  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
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