More than 300 homologs were found in PanDaTox collection
for query gene Tcur_3511 on replicon NC_013510
Organism: Thermomonospora curvata DSM 43183



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013510  Tcur_3511  short-chain dehydrogenase/reductase SDR  100 
 
 
264 aa  529  1e-149  Thermomonospora curvata DSM 43183  Bacteria  normal  0.531457  n/a   
 
 
-
 
NC_008146  Mmcs_0294  short-chain dehydrogenase/reductase SDR  64.23 
 
 
264 aa  323  1e-87  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0304  short-chain dehydrogenase/reductase SDR  64.23 
 
 
264 aa  323  1e-87  Mycobacterium sp. KMS  Bacteria  normal  normal  0.20364 
 
 
-
 
NC_009077  Mjls_0285  short-chain dehydrogenase/reductase SDR  63.85 
 
 
264 aa  322  4e-87  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4545  short-chain dehydrogenase/reductase SDR  62.99 
 
 
261 aa  316  2e-85  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.384179 
 
 
-
 
NC_008726  Mvan_2633  short-chain dehydrogenase/reductase SDR  58.08 
 
 
276 aa  292  3e-78  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.364215  normal 
 
 
-
 
NC_009921  Franean1_1909  short-chain dehydrogenase/reductase SDR  49 
 
 
256 aa  238  8e-62  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7149  short-chain dehydrogenase/reductase SDR  47.16 
 
 
265 aa  204  2e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0163274 
 
 
-
 
NC_009077  Mjls_0034  short-chain dehydrogenase/reductase SDR  42.46 
 
 
270 aa  192  6e-48  Mycobacterium sp. JLS  Bacteria  normal  normal  0.155625 
 
 
-
 
NC_008146  Mmcs_0044  short-chain dehydrogenase/reductase SDR  42.06 
 
 
270 aa  188  8e-47  Mycobacterium sp. MCS  Bacteria  normal  0.442455  n/a   
 
 
-
 
NC_008705  Mkms_0053  short-chain dehydrogenase/reductase SDR  42.06 
 
 
270 aa  188  8e-47  Mycobacterium sp. KMS  Bacteria  normal  0.0110329  normal  0.0245266 
 
 
-
 
NC_009338  Mflv_2380  short-chain dehydrogenase/reductase SDR  38.21 
 
 
271 aa  160  2e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1940  short-chain dehydrogenase/reductase SDR  38.43 
 
 
275 aa  155  8e-37  Caulobacter sp. K31  Bacteria  normal  0.320564  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  33.48 
 
 
255 aa  133  3e-30  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3576  short-chain dehydrogenase/reductase SDR  35.27 
 
 
276 aa  130  2.0000000000000002e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  35.89 
 
 
261 aa  127  1.0000000000000001e-28  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  36.36 
 
 
264 aa  126  3e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  38.64 
 
 
268 aa  126  4.0000000000000003e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  35.48 
 
 
261 aa  125  1e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_6445  short-chain dehydrogenase/reductase SDR  34.34 
 
 
272 aa  120  1.9999999999999998e-26  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  34.06 
 
 
273 aa  118  9e-26  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  34.33 
 
 
271 aa  117  9.999999999999999e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  36.53 
 
 
266 aa  118  9.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  38.14 
 
 
258 aa  117  1.9999999999999998e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  39.13 
 
 
253 aa  114  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  36.07 
 
 
259 aa  113  3e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  34.35 
 
 
264 aa  113  3e-24  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_008254  Meso_3682  short-chain dehydrogenase/reductase SDR  35.43 
 
 
261 aa  113  3e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  37.44 
 
 
260 aa  112  6e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  33.33 
 
 
256 aa  108  1e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_009921  Franean1_2362  short chain oxidoreductase  49.57 
 
 
128 aa  107  2e-22  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0558565 
 
 
-
 
NC_007925  RPC_1224  short-chain dehydrogenase/reductase SDR  33.93 
 
 
261 aa  107  2e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.000362575 
 
 
-
 
NC_013037  Dfer_5585  short-chain dehydrogenase/reductase SDR  35.34 
 
 
265 aa  107  2e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.892025  normal  0.853623 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  36.8 
 
 
253 aa  106  3e-22  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  31.82 
 
 
298 aa  105  8e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_008752  Aave_3574  short-chain dehydrogenase/reductase SDR  34.26 
 
 
267 aa  105  8e-22  Acidovorax citrulli AAC00-1  Bacteria  normal  0.259441  normal  0.335877 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  34.63 
 
 
263 aa  104  2e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  31.17 
 
 
263 aa  103  3e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  34.19 
 
 
269 aa  103  3e-21  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  35.71 
 
 
260 aa  103  4e-21  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  35.71 
 
 
262 aa  102  5e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009046  PICST_79198  beta-hydroxysteroid dehydrogenase type 3  30.53 
 
 
346 aa  102  6e-21  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.103283  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  36.22 
 
 
262 aa  102  7e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  34.63 
 
 
271 aa  102  8e-21  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  31.6 
 
 
344 aa  102  8e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  31.84 
 
 
255 aa  101  1e-20  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  35.42 
 
 
291 aa  100  2e-20  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  36.17 
 
 
252 aa  101  2e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_012853  Rleg_5590  short-chain dehydrogenase/reductase SDR  32.06 
 
 
266 aa  101  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.263195  hitchhiker  0.00574732 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  35.71 
 
 
262 aa  100  2e-20  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5904  short-chain dehydrogenase/reductase SDR  32.54 
 
 
265 aa  100  3e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.708406  normal 
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  38.83 
 
 
259 aa  100  3e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  35.57 
 
 
257 aa  100  3e-20  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  34.69 
 
 
262 aa  99.8  4e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2980  short-chain dehydrogenase/reductase SDR  35 
 
 
271 aa  99.8  4e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  36.8 
 
 
263 aa  99.8  4e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  34.07 
 
 
269 aa  99.8  5e-20  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  32.11 
 
 
265 aa  99  6e-20  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  38.12 
 
 
255 aa  99  6e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0445  short-chain dehydrogenase/reductase SDR  32.13 
 
 
267 aa  98.6  1e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.810235  normal  0.221701 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  35.85 
 
 
265 aa  98.6  1e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
BN001301  ANIA_05861  3-ketoacyl-CoA reductase (3-ketoreductase)(KAR)(EC 1.1.1.-)(Microsomal beta-keto-reductase) [Source:UniProtKB/Swiss-Prot;Acc:Q5B0R9]  31.96 
 
 
346 aa  97.8  2e-19  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0426828  normal  0.51731 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  35.79 
 
 
275 aa  97.8  2e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  35.79 
 
 
269 aa  97.4  2e-19  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  36.68 
 
 
258 aa  97.1  2e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  33.19 
 
 
259 aa  96.7  3e-19  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  33.67 
 
 
264 aa  96.3  4e-19  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  37.5 
 
 
264 aa  96.3  4e-19  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  37.44 
 
 
262 aa  96.7  4e-19  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  37.44 
 
 
262 aa  96.3  4e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  37.44 
 
 
262 aa  96.3  4e-19  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  30.99 
 
 
269 aa  96.3  5e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  32.89 
 
 
262 aa  95.9  6e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  33.47 
 
 
268 aa  95.9  6e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  33.67 
 
 
264 aa  95.9  7e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  36.36 
 
 
264 aa  95.5  8e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  37.37 
 
 
265 aa  95.1  1e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  34.54 
 
 
266 aa  94.7  1e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  33.64 
 
 
260 aa  94  2e-18  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  33.03 
 
 
269 aa  94.4  2e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  33.8 
 
 
261 aa  94.4  2e-18  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  34.93 
 
 
259 aa  94.4  2e-18  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  36.48 
 
 
258 aa  94.4  2e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  30.08 
 
 
261 aa  94  2e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  35.38 
 
 
266 aa  94.4  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  32.46 
 
 
261 aa  93.6  3e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  35.29 
 
 
249 aa  93.6  3e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  31.82 
 
 
264 aa  93.6  3e-18  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009429  Rsph17025_3335  hypothetical protein  34.82 
 
 
249 aa  93.6  3e-18  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2531  normal  0.255614 
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  31.97 
 
 
272 aa  93.2  4e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  35.04 
 
 
260 aa  93.2  4e-18  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  28.7 
 
 
261 aa  93.2  4e-18  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.0000113464  decreased coverage  0.000120518 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  34.93 
 
 
258 aa  92.8  5e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  35.07 
 
 
266 aa  92.8  5e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  31.63 
 
 
321 aa  92  8e-18  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  36.68 
 
 
262 aa  91.7  1e-17  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  36.04 
 
 
282 aa  91.3  1e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  33.03 
 
 
264 aa  90.9  2e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009664  Krad_0779  short-chain dehydrogenase/reductase SDR  36.05 
 
 
286 aa  90.9  2e-17  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00749167  decreased coverage  0.00042824 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  31.12 
 
 
263 aa  90.9  2e-17  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>