| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0423 |
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| Symbol | |
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| ID | 6408071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 453845 |
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| End bp | 454624 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710335 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001989459 |
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| Protein GI | 192288854 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.83571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGAAC GTGTAACGTT GATTACAGGC GCATCGGCCG GGATCGGTGT CGAACTGGCG
CGAATTTTTG CAGACAATGC TCATCGGGTG GCCCTGGTGG CGCGGCGTGG CGACCGGCTC
GAATCGCTGG CGGCTGAGAT CCGTGCCAAA GGCGGGCCGG AACCGATCGT AATCGCGTGC
GATCTCGGTA AGCCCGACGC GGCCGAGCAG ATCATCGCGG CGCTTGCCGC TGCCGGCGTC
GAGGTCGAGT ACCTCGTCAA CAACGCCGGA TACGGACTAT TCGGCCGGGC GATGGAGCTC
GATCGCGAAA GCCAGCTTGG TATCATCGAC GTCAATAACA GGGCGCTCAC CGATCTGACG
CTGCGGTTTG CCGACAGCAT CGCACGGCTT CGCGGCGGCA TCCTCAATGT CGCTTCGATC
GCCGGCTTCC TGCCCGGCCC CGGCATGGCG GTGTACTACG CGTCCAAGGC CTATGTGCTG
TCGTTCAGCG AGGCGATGCA TCAGGAGCTC GGGCCGAAGG GCGTGCGCGT CACCGCGCTG
TGCCCCGGCC CGGTGCAGAC CGAGTTCCAG AACCGCGCCG GTTTCGAGCC GGGTTTCGAC
AGCGCCGTGC TCAACGTCAC CCCCGCCGAG GTCGCACGTC AGGCCTATCA GGGACTGATG
AACAACAAGC GGATCGTGCT GCCCGGCCTC GGCGTGAAGA TCGTGCCGTT CCTGCTGCGG
TTCTTTCCGC GCGGCTTCAT CGCTGCCGCC GTCAGCGGCT TCCAGTTGCG CCGCCGCTGA
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| Protein sequence | MTERVTLITG ASAGIGVELA RIFADNAHRV ALVARRGDRL ESLAAEIRAK GGPEPIVIAC
DLGKPDAAEQ IIAALAAAGV EVEYLVNNAG YGLFGRAMEL DRESQLGIID VNNRALTDLT
LRFADSIARL RGGILNVASI AGFLPGPGMA VYYASKAYVL SFSEAMHQEL GPKGVRVTAL
CPGPVQTEFQ NRAGFEPGFD SAVLNVTPAE VARQAYQGLM NNKRIVLPGL GVKIVPFLLR
FFPRGFIAAA VSGFQLRRR
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