| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1909 |
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| Symbol | |
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| ID | 5670310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2288981 |
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| End bp | 2289751 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641240830 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001506252 |
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| Protein GI | 158313744 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGG AGAAGTACGG GCCGTGGGCG CTGGTCGTCG GCGGCTCGGA GGGCATCGGT
GAGAGCTACG CCCGGAAGCT GGCCGCCCAG GGCTTCAAAC TGGTCCTCAC GGCCCGCAAG
ACCGGTCCCT TACAGGTGCT CGCTGATGAT CTGCGCGCGG GCGGCGCGGA GGTGCGCATC
CTGTCCGTCG ACCTGAGCGA GCCGGATGCC CTGGAGCGGA CACGGAGCGT GACCGACGAC
ATCGAGGTCG GCCTGCTCAT CTACAACGCC GGCGCCAACA GCGTCCGCGG TGATTTCGTC
GGGTTGGATC CCGCGGTCTA CCGGTCGGTC ATAGCCGTCA ACGTGCTCGG TCAGGCCGAG
TTTGCGCGGC ACTACGGCGG CCTCATGTGC GCGCGCAAGC GCGGGGGGAT CATCCTGTCC
GGCTCGGGCG CCAGCTTCAT GGGCGCGCCG TCCCTGGCCG CCTACTGCGG GTCGAAGGCC
TTCAGCCGCA TTTTCAGCGA AGCGCTGTGG ATCGAGTGTG AACAGTACGG AGTCGACGTA
CTGCACCTCA GCATCGGCTT CACGGCCACT CCGGCGATGG CCCGGCTGGG TTATCCCCTC
GACGCCGCTC AGGCACCCGA CGAAGCCGCC CAGGAAGCCC TGGACAACAT CGCCAATGGT
CCGTTGTGGA TCGCGGGCGG ACAGTCGTCT CTCGAGACCG CGGTAAACCG GTCCACGGTT
CCGGGGCGAG CCGAGGCAGT TCGGGCGTTC GCCACCCCGG GACGGTTCTG A
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| Protein sequence | MNLEKYGPWA LVVGGSEGIG ESYARKLAAQ GFKLVLTARK TGPLQVLADD LRAGGAEVRI
LSVDLSEPDA LERTRSVTDD IEVGLLIYNA GANSVRGDFV GLDPAVYRSV IAVNVLGQAE
FARHYGGLMC ARKRGGIILS GSGASFMGAP SLAAYCGSKA FSRIFSEALW IECEQYGVDV
LHLSIGFTAT PAMARLGYPL DAAQAPDEAA QEALDNIANG PLWIAGGQSS LETAVNRSTV
PGRAEAVRAF ATPGRF
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