| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0906 |
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| Symbol | |
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| ID | 4171960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1076474 |
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| End bp | 1077295 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638053907 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_660486 |
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| Protein GI | 109897231 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.127379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT TAACGTTCAA GAACAAAACG GTACTAATCA CTGGAGCATC TTCTGGTATT
GGTAAAGAGT TCGCCCATCA ACTTGCCAGC CAGAATGCAA ACTTAATCAT TACAGCCAGA
ACAAACAGTG TTCTTGTTGA GGTAGCGAAA GAATTACAGT CTAAAAATTC GAGTATTTGG
GTAAAAACAA TAGATGTTGA TCTTAGTGAA CCTGGTGGTG CCCAATTGCT ATTTTCAAAA
ATTGACGACA TGGATTTACC AGTAAATTTT TTAATAAATA ATGCCGGCTT TGGAAAGTTT
TGTGAATTTT CAGACGAAAC CTTTTCAAAC TATCATAAAA TGATGATGCT CAATATGCAT
GCCCTTGTCG AGCTTACTCA CTTATTTCTC CCGCATATGA AAAAGCAAAA CAGTGGTGGT
ATTATTAATG TTGGCTCTAC AGGATCTTTT CAACCATTAC CTTACCAAGC AGTCTATGGC
GCCTGTAAGG CTTTCGTATT GAACTTTTCA GAAGCTTTAT CAGGTGAATT GTTAGATACA
AACATTCGAG TTATGGCCTT ATGCCCTGGT GTAACCGAAT CTAACTTTAT GAAAAGAGCA
AATGCAGATA CATCAAAAAT GAAGTTTTCA TCAACAGGAA AAGTTGTAAA CAATGCATTA
AGTGCATATG GGAAAAACCG TGTATACGTA GTATCTGGAT GCGTTAATTA TTTAACATCA
TTAGTACCTC GTTTTGTTTC ACGGAAAACA GCAGTAATAA CTGTTGCCAA CATGTTCAAA
AATAGTGTCT TAAATAATAT CGCCCAGCGA AAAAACGCAT AA
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| Protein sequence | MKNLTFKNKT VLITGASSGI GKEFAHQLAS QNANLIITAR TNSVLVEVAK ELQSKNSSIW
VKTIDVDLSE PGGAQLLFSK IDDMDLPVNF LINNAGFGKF CEFSDETFSN YHKMMMLNMH
ALVELTHLFL PHMKKQNSGG IINVGSTGSF QPLPYQAVYG ACKAFVLNFS EALSGELLDT
NIRVMALCPG VTESNFMKRA NADTSKMKFS STGKVVNNAL SAYGKNRVYV VSGCVNYLTS
LVPRFVSRKT AVITVANMFK NSVLNNIAQR KNA
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