More than 300 homologs were found in PanDaTox collection
for query gene Slin_6445 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_6445  short-chain dehydrogenase/reductase SDR  100 
 
 
272 aa  547  1e-155  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  57.47 
 
 
268 aa  291  1e-77  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  37.93 
 
 
263 aa  155  6e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  36.11 
 
 
266 aa  149  5e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  35.08 
 
 
266 aa  143  3e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  37.3 
 
 
260 aa  139  3.9999999999999997e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  34.94 
 
 
267 aa  139  4.999999999999999e-32  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  37.5 
 
 
262 aa  139  7e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  31.8 
 
 
257 aa  138  7.999999999999999e-32  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  36.29 
 
 
261 aa  138  7.999999999999999e-32  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3576  short-chain dehydrogenase/reductase SDR  34.1 
 
 
276 aa  137  2e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  35.74 
 
 
266 aa  136  3.0000000000000003e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  33.06 
 
 
256 aa  135  5e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  34.13 
 
 
261 aa  135  7.000000000000001e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  32.9 
 
 
255 aa  135  7.000000000000001e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  37.08 
 
 
268 aa  134  9.999999999999999e-31  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  33.61 
 
 
262 aa  134  9.999999999999999e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  34.94 
 
 
271 aa  135  9.999999999999999e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  33.73 
 
 
261 aa  134  1.9999999999999998e-30  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  36.08 
 
 
261 aa  133  3.9999999999999996e-30  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  35.25 
 
 
267 aa  132  5e-30  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  33.47 
 
 
258 aa  132  6e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  34.73 
 
 
258 aa  131  1.0000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  31.03 
 
 
264 aa  131  1.0000000000000001e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  33.89 
 
 
258 aa  130  2.0000000000000002e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  34.96 
 
 
273 aa  130  2.0000000000000002e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  31.03 
 
 
258 aa  129  4.0000000000000003e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  33.74 
 
 
264 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  33.88 
 
 
258 aa  128  1.0000000000000001e-28  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  33.2 
 
 
257 aa  126  3e-28  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  29.96 
 
 
255 aa  126  4.0000000000000003e-28  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  34.17 
 
 
298 aa  126  4.0000000000000003e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_009077  Mjls_0285  short-chain dehydrogenase/reductase SDR  35.32 
 
 
264 aa  126  5e-28  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0294  short-chain dehydrogenase/reductase SDR  35.32 
 
 
264 aa  125  6e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0304  short-chain dehydrogenase/reductase SDR  35.32 
 
 
264 aa  125  6e-28  Mycobacterium sp. KMS  Bacteria  normal  normal  0.20364 
 
 
-
 
NC_009077  Mjls_0034  short-chain dehydrogenase/reductase SDR  37.91 
 
 
270 aa  125  9e-28  Mycobacterium sp. JLS  Bacteria  normal  normal  0.155625 
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  32.56 
 
 
261 aa  124  1e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  29.75 
 
 
262 aa  125  1e-27  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  40.68 
 
 
258 aa  124  1e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  35.24 
 
 
269 aa  124  1e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_008146  Mmcs_0044  short-chain dehydrogenase/reductase SDR  36.81 
 
 
270 aa  123  3e-27  Mycobacterium sp. MCS  Bacteria  normal  0.442455  n/a   
 
 
-
 
NC_008705  Mkms_0053  short-chain dehydrogenase/reductase SDR  36.81 
 
 
270 aa  123  3e-27  Mycobacterium sp. KMS  Bacteria  normal  0.0110329  normal  0.0245266 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  39.38 
 
 
273 aa  123  4e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  33.61 
 
 
269 aa  122  6e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  32.31 
 
 
263 aa  121  9.999999999999999e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  38.69 
 
 
271 aa  121  9.999999999999999e-27  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7149  short-chain dehydrogenase/reductase SDR  38.33 
 
 
265 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0163274 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  35.51 
 
 
252 aa  120  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009338  Mflv_4545  short-chain dehydrogenase/reductase SDR  35.35 
 
 
261 aa  120  1.9999999999999998e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.384179 
 
 
-
 
NC_013510  Tcur_3511  short-chain dehydrogenase/reductase SDR  34.34 
 
 
264 aa  120  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.531457  n/a   
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  33.86 
 
 
259 aa  120  3e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  34.17 
 
 
255 aa  120  3e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  30.77 
 
 
259 aa  119  7.999999999999999e-26  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  34.7 
 
 
264 aa  118  9.999999999999999e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  32.1 
 
 
262 aa  118  9.999999999999999e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  31.42 
 
 
289 aa  118  9.999999999999999e-26  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_009356  OSTLU_36064  predicted protein  33.59 
 
 
278 aa  118  9.999999999999999e-26  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_006368  lpp1382  hypothetical protein  29.96 
 
 
259 aa  117  1.9999999999999998e-25  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  33.73 
 
 
291 aa  117  1.9999999999999998e-25  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  25.4 
 
 
265 aa  117  1.9999999999999998e-25  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_013204  Elen_0666  short-chain dehydrogenase/reductase SDR  33.33 
 
 
343 aa  117  1.9999999999999998e-25  Eggerthella lenta DSM 2243  Bacteria  normal  0.019294  hitchhiker  0.000464867 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  31.01 
 
 
269 aa  116  3e-25  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  39.78 
 
 
292 aa  117  3e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  25.4 
 
 
265 aa  117  3e-25  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  35.54 
 
 
250 aa  117  3e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  29.51 
 
 
260 aa  116  3.9999999999999997e-25  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  35.25 
 
 
268 aa  116  3.9999999999999997e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  31.8 
 
 
268 aa  116  5e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  34 
 
 
260 aa  116  5e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  34.83 
 
 
269 aa  115  6e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_011891  A2cp1_3990  short-chain dehydrogenase/reductase SDR  39.25 
 
 
266 aa  115  6.9999999999999995e-25  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6207  short-chain dehydrogenase/reductase SDR  33.98 
 
 
277 aa  115  8.999999999999998e-25  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  32.24 
 
 
259 aa  114  1.0000000000000001e-24  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  32.77 
 
 
257 aa  114  1.0000000000000001e-24  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  27.73 
 
 
257 aa  114  2.0000000000000002e-24  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  35 
 
 
259 aa  114  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0445  short-chain dehydrogenase/reductase SDR  33.6 
 
 
267 aa  114  2.0000000000000002e-24  Cyanothece sp. PCC 7425  Bacteria  normal  0.810235  normal  0.221701 
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  33.64 
 
 
263 aa  113  3e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3912  short-chain dehydrogenase/reductase SDR  38.71 
 
 
266 aa  113  3e-24  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  35.86 
 
 
253 aa  113  3e-24  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  33.33 
 
 
259 aa  113  4.0000000000000004e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  34.51 
 
 
262 aa  113  4.0000000000000004e-24  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  34.38 
 
 
262 aa  112  5e-24  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  34.38 
 
 
262 aa  112  5e-24  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  28.4 
 
 
256 aa  112  6e-24  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  36.6 
 
 
282 aa  112  6e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  35.42 
 
 
250 aa  112  9e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_009077  Mjls_3643  short-chain dehydrogenase/reductase SDR  35.66 
 
 
268 aa  110  2.0000000000000002e-23  Mycobacterium sp. JLS  Bacteria  normal  0.129425  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  34.44 
 
 
262 aa  110  2.0000000000000002e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  27.76 
 
 
261 aa  110  3e-23  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.0000113464  decreased coverage  0.000120518 
 
 
-
 
NC_008726  Mvan_2633  short-chain dehydrogenase/reductase SDR  34.34 
 
 
276 aa  110  3e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.364215  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  35.11 
 
 
264 aa  109  4.0000000000000004e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  35.98 
 
 
264 aa  109  5e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_008705  Mkms_3711  short-chain dehydrogenase/reductase SDR  35.25 
 
 
268 aa  109  5e-23  Mycobacterium sp. KMS  Bacteria  normal  0.428554  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  33.59 
 
 
263 aa  109  5e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  34.13 
 
 
253 aa  109  6e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  36.48 
 
 
276 aa  109  6e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  28 
 
 
258 aa  109  6e-23  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  33.73 
 
 
259 aa  108  6e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  33.47 
 
 
272 aa  108  7.000000000000001e-23  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>