Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3643 |
Symbol | |
ID | 4879354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 3851203 |
End bp | 3852009 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640140950 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001071911 |
Protein GI | 126436220 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.129425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTAC CCGCACCCCG CCCCGATGCC CGCGCGGTCG TGACCGGCGC GTCCCAGAAC ATCGGCGAAG CGCTGGCCAC CGAGTTGGCC GCGCGTGGAC ACCACCTGAT CATCACGGCG CGCCGCGAAG AAGTGCTCAC CACGTTGGCG GCCCGGCTGA CCGAGCGCTA CGGCGTGACG GTCGAGGTGC GCCCGGTGGA CCTGGCCGAT CCGGCCGCCC GCACCGCGCT GTGTGACGAG CTGGCGACCC GCGAGATCTC CATCCTGTGC GCCAACGCCG GGACCGCCAC GTTCGGGCCC GTCGCGCGGC TCGACCCCGC CGACGAGAAG GCGCAGGTCC AGTTGAACGT GCTCGGCGTG CACGATCTGG TGCTCGCCGT GCTGCCCGGG ATGGTGGCGC GTCGGTCCGG CGGCATCCTG ATCTCCGGAT CGGCGGCCGG GAACTCCCCC ATCCCGAACA ACGCGACCTA CGCGGCGACC AAGGCGTTCG TCAATACATT CAGCGAATCG CTGCGCGGTG AGCTCAAGGG TGTCGGTGTG CACGTCACGC TGCTCGCGCC CGGCCCGGTG CGCGAGACCC TGCCCGACGA ACACGAGCAG TCGCTGGTGG AGAGGCTCAT CCCCGACTTC CTGTGGATCT CGACGGAGTA CACCGCCAAA CTCTCCCTCG ACGGGCTGGA GAGCAACAAG ATGCGGGTGG TGCCGGGGGT GACGTCGAAG GCCATGTCGG TGGCCAGCGG GTACGCCCCG CGCGCGATCG TCACGCCGAT CGTCGGCGCG GTCTACAAGA AGCTCGGCGG CGACTGA
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Protein sequence | MPVPAPRPDA RAVVTGASQN IGEALATELA ARGHHLIITA RREEVLTTLA ARLTERYGVT VEVRPVDLAD PAARTALCDE LATREISILC ANAGTATFGP VARLDPADEK AQVQLNVLGV HDLVLAVLPG MVARRSGGIL ISGSAAGNSP IPNNATYAAT KAFVNTFSES LRGELKGVGV HVTLLAPGPV RETLPDEHEQ SLVERLIPDF LWISTEYTAK LSLDGLESNK MRVVPGVTSK AMSVASGYAP RAIVTPIVGA VYKKLGGD
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