More than 300 homologs were found in PanDaTox collection
for query gene CHU_3621 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_3621  short-chain dehydrogenase  100 
 
 
258 aa  526  1e-148  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  53.91 
 
 
258 aa  278  6e-74  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  52.49 
 
 
256 aa  271  6e-72  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  52.55 
 
 
262 aa  269  2.9999999999999997e-71  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  47.86 
 
 
257 aa  248  7e-65  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  41.27 
 
 
264 aa  192  4e-48  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  39.06 
 
 
262 aa  183  2.0000000000000003e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  40 
 
 
266 aa  184  2.0000000000000003e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  37.7 
 
 
263 aa  182  6e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  40.39 
 
 
266 aa  179  4e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  38.27 
 
 
261 aa  178  8e-44  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  36.99 
 
 
264 aa  177  1e-43  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  37.4 
 
 
256 aa  176  2e-43  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  37.86 
 
 
261 aa  175  5e-43  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  38.49 
 
 
267 aa  173  1.9999999999999998e-42  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  40.35 
 
 
258 aa  172  5.999999999999999e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  38.71 
 
 
260 aa  170  2e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  36.25 
 
 
263 aa  171  2e-41  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  38.25 
 
 
258 aa  169  5e-41  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  41.71 
 
 
264 aa  168  1e-40  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  36.61 
 
 
259 aa  166  2.9999999999999998e-40  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  37.84 
 
 
258 aa  164  1.0000000000000001e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  39.18 
 
 
257 aa  163  2.0000000000000002e-39  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  38.52 
 
 
272 aa  162  6e-39  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  36.22 
 
 
259 aa  162  6e-39  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  35.29 
 
 
259 aa  162  7e-39  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  37.07 
 
 
258 aa  161  1e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  37.3 
 
 
271 aa  160  3e-38  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  37.4 
 
 
273 aa  159  4e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  33.33 
 
 
257 aa  157  1e-37  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  37.25 
 
 
262 aa  157  1e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  37.45 
 
 
259 aa  157  1e-37  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  35.29 
 
 
262 aa  157  2e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  35.69 
 
 
255 aa  157  2e-37  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  35.29 
 
 
262 aa  157  2e-37  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  38.21 
 
 
262 aa  156  3e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  35.29 
 
 
262 aa  156  3e-37  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  36.47 
 
 
263 aa  155  7e-37  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  33.85 
 
 
291 aa  154  1e-36  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  35.34 
 
 
267 aa  154  1e-36  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3974  short-chain dehydrogenase/reductase SDR  34.23 
 
 
264 aa  154  1e-36  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.036497  normal  0.609933 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  37.25 
 
 
321 aa  154  2e-36  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  37.12 
 
 
260 aa  153  2.9999999999999998e-36  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  37.25 
 
 
263 aa  152  4e-36  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  34.66 
 
 
267 aa  152  5.9999999999999996e-36  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_012792  Vapar_6207  short-chain dehydrogenase/reductase SDR  34.38 
 
 
277 aa  151  8e-36  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  36.89 
 
 
259 aa  151  8.999999999999999e-36  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  34.12 
 
 
257 aa  150  1e-35  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  34.16 
 
 
260 aa  149  4e-35  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  33.46 
 
 
260 aa  149  6e-35  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  36.08 
 
 
269 aa  148  7e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  35.74 
 
 
298 aa  148  9e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  38.46 
 
 
266 aa  147  1.0000000000000001e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  35.18 
 
 
258 aa  147  2.0000000000000003e-34  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_007908  Rfer_0310  short-chain dehydrogenase/reductase SDR  35.94 
 
 
284 aa  147  2.0000000000000003e-34  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  33.33 
 
 
273 aa  146  2.0000000000000003e-34  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  33.33 
 
 
257 aa  147  2.0000000000000003e-34  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  38.77 
 
 
258 aa  146  3e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  34.68 
 
 
264 aa  146  3e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  38.42 
 
 
275 aa  145  4.0000000000000006e-34  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  36.95 
 
 
269 aa  145  5e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_011891  A2cp1_3990  short-chain dehydrogenase/reductase SDR  34.25 
 
 
266 aa  144  1e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  39.38 
 
 
259 aa  144  1e-33  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  32.55 
 
 
268 aa  144  1e-33  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  33.86 
 
 
292 aa  144  1e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  33.99 
 
 
257 aa  144  1e-33  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3711  short-chain dehydrogenase/reductase SDR  32.94 
 
 
268 aa  144  1e-33  Mycobacterium sp. KMS  Bacteria  normal  0.428554  normal 
 
 
-
 
NC_009077  Mjls_3643  short-chain dehydrogenase/reductase SDR  32.94 
 
 
268 aa  144  1e-33  Mycobacterium sp. JLS  Bacteria  normal  0.129425  normal 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  41.94 
 
 
259 aa  144  2e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013037  Dfer_5585  short-chain dehydrogenase/reductase SDR  35.22 
 
 
265 aa  142  4e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.892025  normal  0.853623 
 
 
-
 
NC_002947  PP_0429  short chain dehydrogenase/reductase family oxidoreductase  35.52 
 
 
260 aa  142  7e-33  Pseudomonas putida KT2440  Bacteria  normal  normal  0.406504 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  35.16 
 
 
266 aa  142  7e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3638  short-chain dehydrogenase/reductase SDR  32.81 
 
 
255 aa  142  7e-33  Mycobacterium sp. MCS  Bacteria  normal  0.125829  n/a   
 
 
-
 
NC_009512  Pput_0462  short-chain dehydrogenase/reductase SDR  35.52 
 
 
260 aa  141  9e-33  Pseudomonas putida F1  Bacteria  normal  0.767614  hitchhiker  0.00534124 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  37.89 
 
 
275 aa  141  9e-33  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  35.18 
 
 
276 aa  140  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  33.46 
 
 
289 aa  141  9.999999999999999e-33  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_011145  AnaeK_3912  short-chain dehydrogenase/reductase SDR  33.46 
 
 
266 aa  140  9.999999999999999e-33  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  36.32 
 
 
264 aa  140  1.9999999999999998e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  32.13 
 
 
261 aa  140  1.9999999999999998e-32  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  36.32 
 
 
264 aa  140  3e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0459  short-chain dehydrogenase/reductase SDR  35.14 
 
 
260 aa  140  3e-32  Pseudomonas putida GB-1  Bacteria  normal  normal  0.240703 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  36.32 
 
 
264 aa  140  3e-32  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  36.32 
 
 
264 aa  140  3e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  36.32 
 
 
264 aa  140  3e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  31.33 
 
 
261 aa  139  3e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  36.32 
 
 
264 aa  139  3.9999999999999997e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  36.86 
 
 
265 aa  139  3.9999999999999997e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_010501  PputW619_4774  short-chain dehydrogenase/reductase SDR  35.91 
 
 
260 aa  139  4.999999999999999e-32  Pseudomonas putida W619  Bacteria  normal  normal  0.45506 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  32.78 
 
 
259 aa  139  4.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  33.88 
 
 
263 aa  139  6e-32  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  30.95 
 
 
265 aa  139  7e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  31.5 
 
 
261 aa  138  7e-32  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.0000113464  decreased coverage  0.000120518 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  35.87 
 
 
264 aa  138  7.999999999999999e-32  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_008726  Mvan_4098  short-chain dehydrogenase/reductase SDR  32.03 
 
 
268 aa  138  7.999999999999999e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.230051  normal 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  35.87 
 
 
264 aa  137  1e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  35.87 
 
 
264 aa  137  1e-31  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  36.32 
 
 
264 aa  138  1e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  33.33 
 
 
268 aa  137  2e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  35.2 
 
 
253 aa  137  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
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