| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3329 |
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| Symbol | |
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| ID | 8359495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4093083 |
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| End bp | 4093853 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644965502 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122997 |
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| Protein GI | 256422344 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.227726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00265893 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATACG CACTCATTAC AGGGGCCAGT AAAGGTATTG GTCTGTCTAT GGCACACGCC
CTTGCTTCCA GAAAATATGA TTTACTGTTA ATCGCCCGTT CGGAGCAGGA ACTCACTGCT
GCCGCCAATG AATTGCGTAA TAAATGGCAG GTAGAGGTAG CCTGGCTGGC CATTGATCTG
TCCTCCCCTG AAGCAGCTGC CCGTGTCGCT GAATGGGCGG GCAGGTATCC CGTCTCTATC
CTGATCAATA ATGCCGGCTA CGGTGTATGG GGCAACTTTT CCGACCGCTC TTTATCTGAG
CACCAGCAGA TGATTCAGGT GAATGCGGAA ACACCGGTGG CACTTTGTCA TCACCTCCTG
CCTGTATTGC GTCAGCAACC ACAGGCTTAT ATATTAAATG TCTCCAGTAC GGCTGCTTAT
CAGGCGGTGG CCACGCTGAC CTTGTATGCG GCGACCAAGT CGTTTATGCT GTTGTTTTCA
AGGGGTTTGA GACAGGAGCT GAAAAAGAGT AATGTGTCGG TGACGTGTTT GTGTCCGGGG
CCGGTGAAGA CGAATTTTAT TGATCGTGCG GGCATGCAGG CGATCAAGGA GACGGCGGAT
AAATACGGTA TGTTGGCGGA TGATGTGGCG GATATTGCCA TTAAAGGCAT GTTCCGGAAG
AAAGCGGAGA TTATTCCCGG GGCGATGAAT GTGGTGACGG CGTTTATGAC GCGGATAGTG
CCGAAGGCAA TCGTAGAAGC AGTGGCCGCC AATCTTTATA AGACCAGATA A
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| Protein sequence | MTYALITGAS KGIGLSMAHA LASRKYDLLL IARSEQELTA AANELRNKWQ VEVAWLAIDL
SSPEAAARVA EWAGRYPVSI LINNAGYGVW GNFSDRSLSE HQQMIQVNAE TPVALCHHLL
PVLRQQPQAY ILNVSSTAAY QAVATLTLYA ATKSFMLLFS RGLRQELKKS NVSVTCLCPG
PVKTNFIDRA GMQAIKETAD KYGMLADDVA DIAIKGMFRK KAEIIPGAMN VVTAFMTRIV
PKAIVEAVAA NLYKTR
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