More than 300 homologs were found in PanDaTox collection
for query gene Cpin_3329 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  100 
 
 
256 aa  528  1e-149  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  53.15 
 
 
262 aa  288  5.0000000000000004e-77  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  54.33 
 
 
258 aa  279  3e-74  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  52.49 
 
 
258 aa  271  6e-72  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  47.47 
 
 
257 aa  245  6e-64  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  40.87 
 
 
266 aa  177  1e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  39.68 
 
 
266 aa  177  2e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  37.25 
 
 
262 aa  172  3.9999999999999995e-42  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  40.98 
 
 
272 aa  167  2e-40  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  36.72 
 
 
263 aa  167  2e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  38.49 
 
 
263 aa  161  1e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  36.72 
 
 
258 aa  159  4e-38  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  35.83 
 
 
264 aa  158  6e-38  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  33.72 
 
 
264 aa  155  6e-37  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  37.1 
 
 
261 aa  154  1e-36  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009675  Anae109_3974  short-chain dehydrogenase/reductase SDR  36.61 
 
 
264 aa  152  5e-36  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.036497  normal  0.609933 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  36.69 
 
 
261 aa  152  5.9999999999999996e-36  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  36.61 
 
 
258 aa  152  5.9999999999999996e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  34.88 
 
 
258 aa  152  5.9999999999999996e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  33.59 
 
 
273 aa  152  7e-36  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  39.33 
 
 
262 aa  151  8e-36  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  35.04 
 
 
259 aa  150  2e-35  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp1382  hypothetical protein  35.04 
 
 
259 aa  149  4e-35  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  36.4 
 
 
262 aa  149  5e-35  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  36.4 
 
 
262 aa  149  5e-35  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  36.29 
 
 
262 aa  149  6e-35  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  36.22 
 
 
258 aa  148  8e-35  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  42.05 
 
 
259 aa  148  1.0000000000000001e-34  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  37.04 
 
 
263 aa  147  2.0000000000000003e-34  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  35.92 
 
 
267 aa  147  2.0000000000000003e-34  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  37.04 
 
 
321 aa  147  2.0000000000000003e-34  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  33.73 
 
 
267 aa  146  3e-34  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  33.72 
 
 
260 aa  145  8.000000000000001e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011891  A2cp1_3990  short-chain dehydrogenase/reductase SDR  35.97 
 
 
266 aa  144  1e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  36.36 
 
 
292 aa  144  1e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  33.2 
 
 
291 aa  144  1e-33  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  30.8 
 
 
265 aa  143  2e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  33.46 
 
 
298 aa  143  2e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  30.8 
 
 
265 aa  143  3e-33  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3912  short-chain dehydrogenase/reductase SDR  35.57 
 
 
266 aa  143  3e-33  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  34.25 
 
 
261 aa  142  4e-33  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.0000113464  decreased coverage  0.000120518 
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  37.77 
 
 
265 aa  140  9.999999999999999e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  34.51 
 
 
275 aa  141  9.999999999999999e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  36.11 
 
 
276 aa  140  1.9999999999999998e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  37.24 
 
 
264 aa  139  3e-32  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  33.85 
 
 
269 aa  139  3.9999999999999997e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  35.71 
 
 
264 aa  139  4.999999999999999e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  31.89 
 
 
255 aa  139  4.999999999999999e-32  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_012792  Vapar_6207  short-chain dehydrogenase/reductase SDR  35.08 
 
 
277 aa  139  4.999999999999999e-32  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  36.08 
 
 
260 aa  139  6e-32  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  31.91 
 
 
260 aa  139  6e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  34.43 
 
 
262 aa  138  8.999999999999999e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  35.27 
 
 
266 aa  137  1e-31  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  33.2 
 
 
256 aa  137  1e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  33.33 
 
 
267 aa  137  2e-31  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  35.27 
 
 
257 aa  137  2e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  34.38 
 
 
273 aa  137  2e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  36.14 
 
 
253 aa  136  3.0000000000000003e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_6445  short-chain dehydrogenase/reductase SDR  33.06 
 
 
272 aa  135  4e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  33.61 
 
 
259 aa  136  4e-31  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  36.69 
 
 
253 aa  135  4e-31  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_007908  Rfer_0310  short-chain dehydrogenase/reductase SDR  35.08 
 
 
284 aa  135  5e-31  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  34.51 
 
 
269 aa  135  5e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  36.44 
 
 
266 aa  135  6.0000000000000005e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  33.98 
 
 
259 aa  135  6.0000000000000005e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  39.02 
 
 
266 aa  135  8e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  34.11 
 
 
259 aa  135  8e-31  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  32.42 
 
 
263 aa  134  9.999999999999999e-31  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  33.74 
 
 
257 aa  134  9.999999999999999e-31  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  33.86 
 
 
252 aa  133  1.9999999999999998e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_008255  CHU_2064  oxidoreductase ( short-chain dehydrogenase)  38 
 
 
264 aa  133  1.9999999999999998e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.694867  normal  0.0846624 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  33.2 
 
 
262 aa  133  1.9999999999999998e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_013926  Aboo_0372  short-chain dehydrogenase/reductase SDR  35.27 
 
 
219 aa  134  1.9999999999999998e-30  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  33.6 
 
 
267 aa  132  5e-30  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  32.42 
 
 
275 aa  132  6e-30  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  34.44 
 
 
257 aa  132  6.999999999999999e-30  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  35.32 
 
 
258 aa  131  1.0000000000000001e-29  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_013204  Elen_0666  short-chain dehydrogenase/reductase SDR  36.59 
 
 
343 aa  131  1.0000000000000001e-29  Eggerthella lenta DSM 2243  Bacteria  normal  0.019294  hitchhiker  0.000464867 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  33.2 
 
 
267 aa  130  2.0000000000000002e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  35.12 
 
 
289 aa  130  2.0000000000000002e-29  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  33.2 
 
 
267 aa  130  2.0000000000000002e-29  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  35.04 
 
 
250 aa  130  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  31.5 
 
 
257 aa  129  3e-29  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_014151  Cfla_2980  short-chain dehydrogenase/reductase SDR  37.72 
 
 
271 aa  129  4.0000000000000003e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  31.75 
 
 
268 aa  129  6e-29  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  33.92 
 
 
264 aa  128  7.000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  34.67 
 
 
264 aa  128  7.000000000000001e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  33.92 
 
 
264 aa  128  7.000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  34.36 
 
 
264 aa  129  7.000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  33.92 
 
 
264 aa  128  7.000000000000001e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  33.92 
 
 
264 aa  128  8.000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  35.39 
 
 
258 aa  128  9.000000000000001e-29  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3244  short-chain dehydrogenase/reductase SDR  32.81 
 
 
262 aa  128  9.000000000000001e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  34.36 
 
 
264 aa  128  1.0000000000000001e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  31.25 
 
 
271 aa  127  1.0000000000000001e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  30.74 
 
 
255 aa  127  2.0000000000000002e-28  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  33.74 
 
 
249 aa  127  2.0000000000000002e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  32.68 
 
 
259 aa  126  3e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  33.48 
 
 
264 aa  126  3e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3682  short-chain dehydrogenase/reductase SDR  33.74 
 
 
261 aa  126  3e-28  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
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