Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0044 |
Symbol | |
ID | 4108893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 55218 |
End bp | 56030 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638029170 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_637222 |
Protein GI | 108797025 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.442455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACATTCG CGCAGAAGTA CGGCCCGTGG GCCGTGGTGG CCGGCGCATC CGACGGTCTG GGCGCCGCCT TCGCCGAGCG GATCGCAGAG AACGGCGTCA ACGTGGTGCT GCTGGCCCGC AGGCAGTCCG TGCTCGACGA CGTGGCCGCG GGCATCCGCG ACCGCACGGG TGTCGAAACT CGCACGCTGG CAATCGACCT CACCGATCCG GCGGCCACCG GCGCCGTCGC CGACGCCACC GACGACCTCG AAGTCGGGTT CCTGGTGTAC TGCGCGGGCG CCGACCCGGC GTTCGAACCG TTCCTCGCGC AACCGATCGA AGCCGCCGAG GCGATGGTGC AGCGCAACTG TGTGGCGCCG ATGCGGCTGT GCCACCATTT CGCGCCGGCG ATGGCCGCAC GCGGGCGCGG CGGCCTCGTG ATCTTCGGGT CGGGCGCCGG ACTGGCCGGC GGCCCGAACA TGGTGGCCTA CGCCGCCACC AAGGCGTTCG ACATGGTGTT CGCCGAAGCC CTGTGGGCCG AACTGCACGA TACGGGCGTC GACGTGCTCG GTCTGATCCT CGGCAAGACC GACACCCCCG CACTGCGGAC CCTGGAACAC CGTCGCGGTC AGATCGCCTC GACGGAGCAG ACGCCGCCCG GCGCCGTCCC GGTCGCAGGC GTCGTCTCCG AGGCCTTCGA CAACCTCGCC AACGGACCCA CCTGGATCGT CGGGGAAGAT CTGCGCGCCG CCACCCAGAT GATGGGGTCG ATCAGCCGCA GCGATGCGGT GCGGTTCATC GTCGAGGCGT CCCGCGACGC GATGGGGCCG TAG
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Protein sequence | MTFAQKYGPW AVVAGASDGL GAAFAERIAE NGVNVVLLAR RQSVLDDVAA GIRDRTGVET RTLAIDLTDP AATGAVADAT DDLEVGFLVY CAGADPAFEP FLAQPIEAAE AMVQRNCVAP MRLCHHFAPA MAARGRGGLV IFGSGAGLAG GPNMVAYAAT KAFDMVFAEA LWAELHDTGV DVLGLILGKT DTPALRTLEH RRGQIASTEQ TPPGAVPVAG VVSEAFDNLA NGPTWIVGED LRAATQMMGS ISRSDAVRFI VEASRDAMGP
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