| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7149 |
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| Symbol | |
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| ID | 5675452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8731559 |
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| End bp | 8732356 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641245988 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001511376 |
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| Protein GI | 158318868 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0163274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA AATACGGACC GTGGGGCATC ATTGCTGGCG GGTCCGACGG AGTCGGCGCC
GCGTTCGCGC ACGAGATGGC AACCCGAGGC CTGAACGTCG TCCTGGTCGC CCGGCGGGTT
CCCGTCCTGG AGGCGTTCGC CGAGGAGATA CGGGCCAAAC ACGGCGTCGA GGTCCGCACG
GTCGCGCTGG ACCTCAGCGT GCCGGGCGCC CTCGCATCGC TCGCGGACGC AACCTCCGAT
CTCGAAATCG GACTGTTCGT CTACAACGCC GGCGGCGACG ACACCAGCGC GCTCTTCCTC
GACAAGGACC TCGATACCCA CCTGAAGCTG ATCCACCGCA ACTGCGACAG CGTCCTCGAA
GCCGCCTACC GCTTCGGCGG CCCGATGGTT GCCCGGCGGC GCGGTGGCCT GGTGCTGGTG
ACCTCCGGCG CGGCCTGGGC CGGCGGCGCG ACGCTCGCCA CCTACGGCGC CACCAAGGCC
TTCGATCTCC TCCTCGCCGA AGCGCTCTGG GCTGAATGGC ACACCAGCGG CGTCGACGTC
CTCGCTCTCG TGCTCGGCAG GACCGACACC CCGTCCATGC GCCGCGTGTT CGACGCGAAA
AACGAACCCT ACGGAGACGC CGCGGACCCG GCCGACGTCG CGAAGCAGGC ACTCGACCAC
CTCGCCGACG GGCCCACCTG GATCTTCGGC AGCCCGAACC CCACCGGCGG TTCACCCTTC
GGCGCGACCA GCCGCCGCGA CGCCGTCCTC ATGATGAGCC AGGGATCATC CACGAGCAGC
GCCAGCACAG GGTCCTAA
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| Protein sequence | MTDKYGPWGI IAGGSDGVGA AFAHEMATRG LNVVLVARRV PVLEAFAEEI RAKHGVEVRT
VALDLSVPGA LASLADATSD LEIGLFVYNA GGDDTSALFL DKDLDTHLKL IHRNCDSVLE
AAYRFGGPMV ARRRGGLVLV TSGAAWAGGA TLATYGATKA FDLLLAEALW AEWHTSGVDV
LALVLGRTDT PSMRRVFDAK NEPYGDAADP ADVAKQALDH LADGPTWIFG SPNPTGGSPF
GATSRRDAVL MMSQGSSTSS ASTGS
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