More than 300 homologs were found in PanDaTox collection
for query gene Krad_0779 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_0779  short-chain dehydrogenase/reductase SDR  100 
 
 
286 aa  553  1e-157  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00749167  decreased coverage  0.00042824 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  52.94 
 
 
269 aa  235  7e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  54.55 
 
 
264 aa  230  2e-59  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  53.17 
 
 
259 aa  229  3e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  48.45 
 
 
262 aa  210  3e-53  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  48.45 
 
 
262 aa  209  6e-53  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  48.45 
 
 
262 aa  209  6e-53  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  49.44 
 
 
271 aa  199  3e-50  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  45.8 
 
 
261 aa  196  4.0000000000000005e-49  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  45.42 
 
 
261 aa  194  1e-48  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  44.57 
 
 
258 aa  191  1e-47  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  43.98 
 
 
271 aa  190  2e-47  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  46.61 
 
 
291 aa  190  2.9999999999999997e-47  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  42.69 
 
 
260 aa  187  2e-46  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  50 
 
 
260 aa  187  2e-46  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  46.24 
 
 
275 aa  186  5e-46  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  47.97 
 
 
263 aa  186  5e-46  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  43.02 
 
 
264 aa  184  1.0000000000000001e-45  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  46.03 
 
 
275 aa  180  2e-44  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  40.62 
 
 
264 aa  174  1.9999999999999998e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  42.8 
 
 
264 aa  174  1.9999999999999998e-42  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  51.32 
 
 
259 aa  170  2e-41  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  44.31 
 
 
259 aa  169  4e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3249  short-chain dehydrogenase/reductase SDR  47.21 
 
 
258 aa  166  4e-40  Caulobacter sp. K31  Bacteria  normal  normal  0.559348 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  45.85 
 
 
267 aa  164  1.0000000000000001e-39  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  41.05 
 
 
257 aa  164  2.0000000000000002e-39  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  45.45 
 
 
267 aa  163  3e-39  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  45.45 
 
 
267 aa  163  3e-39  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  50.52 
 
 
258 aa  162  4.0000000000000004e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  39.68 
 
 
262 aa  157  2e-37  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0497  short-chain dehydrogenase/reductase SDR  38.08 
 
 
360 aa  156  3e-37  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  41.8 
 
 
262 aa  155  8e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  38.28 
 
 
269 aa  155  1e-36  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  36.69 
 
 
262 aa  152  8.999999999999999e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  36.96 
 
 
267 aa  151  8.999999999999999e-36  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  41.63 
 
 
258 aa  151  1e-35  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  43.52 
 
 
259 aa  151  1e-35  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  42.86 
 
 
253 aa  150  2e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  40.23 
 
 
266 aa  150  2e-35  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  34.68 
 
 
259 aa  150  3e-35  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  40.16 
 
 
259 aa  150  3e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  50.27 
 
 
265 aa  149  5e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  44.44 
 
 
276 aa  148  1.0000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  40.07 
 
 
273 aa  148  1.0000000000000001e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  46.6 
 
 
259 aa  147  2.0000000000000003e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  34.68 
 
 
259 aa  146  3e-34  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  37.94 
 
 
263 aa  146  3e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  40.61 
 
 
267 aa  145  5e-34  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  47.37 
 
 
256 aa  145  6e-34  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  44.9 
 
 
259 aa  145  7.0000000000000006e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  39.77 
 
 
266 aa  145  7.0000000000000006e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  49.2 
 
 
266 aa  145  1e-33  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  46.6 
 
 
270 aa  144  2e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  40.49 
 
 
263 aa  144  2e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  43.72 
 
 
259 aa  144  2e-33  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  42.34 
 
 
272 aa  144  2e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  42.65 
 
 
260 aa  143  3e-33  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  40.16 
 
 
267 aa  142  4e-33  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  38.04 
 
 
259 aa  142  5e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  46.07 
 
 
270 aa  142  5e-33  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  34.25 
 
 
257 aa  142  6e-33  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  34.96 
 
 
256 aa  142  8e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  38.75 
 
 
261 aa  142  8e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  41.91 
 
 
266 aa  142  9e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  47.96 
 
 
264 aa  141  9.999999999999999e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  43.28 
 
 
258 aa  141  9.999999999999999e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  43.28 
 
 
258 aa  141  9.999999999999999e-33  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  37.5 
 
 
263 aa  141  1.9999999999999998e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  40.83 
 
 
252 aa  140  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  42.26 
 
 
250 aa  140  1.9999999999999998e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  45 
 
 
270 aa  141  1.9999999999999998e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  37.75 
 
 
259 aa  140  1.9999999999999998e-32  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_010581  Bind_3244  short-chain dehydrogenase/reductase SDR  42.4 
 
 
262 aa  141  1.9999999999999998e-32  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  33.76 
 
 
255 aa  139  3.9999999999999997e-32  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  43.88 
 
 
261 aa  139  4.999999999999999e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  42.86 
 
 
258 aa  139  6e-32  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  41.15 
 
 
261 aa  139  7.999999999999999e-32  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  39.46 
 
 
257 aa  137  2e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2063  short-chain dehydrogenase  38.97 
 
 
261 aa  137  2e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0247773  normal  0.17766 
 
 
-
 
NC_008255  CHU_2064  oxidoreductase ( short-chain dehydrogenase)  40.51 
 
 
264 aa  137  2e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.694867  normal  0.0846624 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  34.11 
 
 
273 aa  136  3.0000000000000003e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  36.05 
 
 
257 aa  137  3.0000000000000003e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  37.93 
 
 
266 aa  136  3.0000000000000003e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  39.69 
 
 
263 aa  136  4e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  42.93 
 
 
265 aa  136  5e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  37.6 
 
 
262 aa  136  5e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  45.6 
 
 
258 aa  135  7.000000000000001e-31  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_013037  Dfer_5585  short-chain dehydrogenase/reductase SDR  38.06 
 
 
265 aa  135  7.000000000000001e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.892025  normal  0.853623 
 
 
-
 
NC_007925  RPC_0055  short-chain dehydrogenase/reductase SDR  39.37 
 
 
259 aa  135  8e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  42.08 
 
 
260 aa  134  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  41.6 
 
 
292 aa  135  9.999999999999999e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_007964  Nham_0606  short-chain dehydrogenase/reductase SDR  46.84 
 
 
256 aa  135  9.999999999999999e-31  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  44.81 
 
 
271 aa  134  9.999999999999999e-31  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  46.88 
 
 
266 aa  134  1.9999999999999998e-30  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  34.82 
 
 
344 aa  134  1.9999999999999998e-30  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  34.91 
 
 
268 aa  134  1.9999999999999998e-30  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  40.61 
 
 
267 aa  134  1.9999999999999998e-30  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  43.98 
 
 
265 aa  134  1.9999999999999998e-30  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  46.84 
 
 
266 aa  134  1.9999999999999998e-30  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  43.16 
 
 
266 aa  133  3e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
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