Gene Slin_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0497 
Symbol 
ID8724225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp613654 
End bp614736 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content51% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003385360 
Protein GI284035430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAG AGACAGGAAA AACTGCCCTG ATTACCGGTG CCTCCAGCGG CATTGGTCAG 
GAACTTGCCA AGCTCTTCGC ACAAGATGGC TATAACCTGG TTTTAGTAGG TCGCAGCGAC
GAAAAACTCG ACCGGCTGGG CGAGGTCTTC AAAAGCAACT ACGGCACCGA TCAGGTTACC
GTCATTACCA AAGACCTGGC TCAGGAAGAT GCCGCGCAGG ATGTCTATAA CCAGGTAAAA
GCCAAGGGCA TTACCGTTAA TGTGCTGGTC AACGATGCCG GGGTAGGGCT GTACGGCCTG
TTTGCTACCG ACACCGACTG GGAGCGGGAG AAGTCGATGA TTCACCTCAA TGTGCTGTCG
CTGACGCAAA TGACCAAGCT GTTTCTGTAC GATATGCTGG CCCGTAACGA GGGTAAAATT
TTGAATCTTG CTTCGCTCCT TTCCATTACT CCTTCGCCAT TAATGGCCGT TTATGCAGGT
ACGAAAGCGT ATGTTTATAA CTTCACGCAG TCGCTGGTTA ACGAGTTGAA AGACACGAAC
GTGAGCATTA CGGCTCTGCT GCCAAACGCT ACGGATACCG ATTTCTTTAA CAAGGCAAAT
GCAGAAAACA CCAAAATAAC CGACGAGCTA CAGGACCCCG TTATGGTTGC GAAAGCCGGT
TATGACGCTC TTATGGCGGG TAAACCGAAG ATTGTACCAG GCGGACTGAA AAATAAATCG
TACGAAGTAA TGGCGTATGT AGCCCCGCAG GAGGCACTGG CCGCGCTGAT GCGTGATAAG
ATGTCGCAGA AGCCGGAGCC CGAAGAAAAG GAACCCATGA TTTCGCTTGC GTGGGGCATT
GGCTTCGGTA TTGCCGTCAT TGCGGGTATT GCGCTGACAA TTGGCTATAA AAACGCCAGC
CCTTACGACA AAGTACGGTA CAAATACAAA GCAAAATCGG CGAGCGACGC CCTGTCCAAC
ACCTTGTCGT CGGTGTTCGA TAAAGTGGCC CATAGCGTTG TAGACGCCTA CCAGACCACC
AAAGGCAAAG CAGAGAAGTT TGCCCATAAG GAAGAGGAAA TGCTGGAAGA TGCAACCGCC
TAA
 
Protein sequence
MNSETGKTAL ITGASSGIGQ ELAKLFAQDG YNLVLVGRSD EKLDRLGEVF KSNYGTDQVT 
VITKDLAQED AAQDVYNQVK AKGITVNVLV NDAGVGLYGL FATDTDWERE KSMIHLNVLS
LTQMTKLFLY DMLARNEGKI LNLASLLSIT PSPLMAVYAG TKAYVYNFTQ SLVNELKDTN
VSITALLPNA TDTDFFNKAN AENTKITDEL QDPVMVAKAG YDALMAGKPK IVPGGLKNKS
YEVMAYVAPQ EALAALMRDK MSQKPEPEEK EPMISLAWGI GFGIAVIAGI ALTIGYKNAS
PYDKVRYKYK AKSASDALSN TLSSVFDKVA HSVVDAYQTT KGKAEKFAHK EEEMLEDATA