Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0497 |
Symbol | |
ID | 8724225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 613654 |
End bp | 614736 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003385360 |
Protein GI | 284035430 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCAG AGACAGGAAA AACTGCCCTG ATTACCGGTG CCTCCAGCGG CATTGGTCAG GAACTTGCCA AGCTCTTCGC ACAAGATGGC TATAACCTGG TTTTAGTAGG TCGCAGCGAC GAAAAACTCG ACCGGCTGGG CGAGGTCTTC AAAAGCAACT ACGGCACCGA TCAGGTTACC GTCATTACCA AAGACCTGGC TCAGGAAGAT GCCGCGCAGG ATGTCTATAA CCAGGTAAAA GCCAAGGGCA TTACCGTTAA TGTGCTGGTC AACGATGCCG GGGTAGGGCT GTACGGCCTG TTTGCTACCG ACACCGACTG GGAGCGGGAG AAGTCGATGA TTCACCTCAA TGTGCTGTCG CTGACGCAAA TGACCAAGCT GTTTCTGTAC GATATGCTGG CCCGTAACGA GGGTAAAATT TTGAATCTTG CTTCGCTCCT TTCCATTACT CCTTCGCCAT TAATGGCCGT TTATGCAGGT ACGAAAGCGT ATGTTTATAA CTTCACGCAG TCGCTGGTTA ACGAGTTGAA AGACACGAAC GTGAGCATTA CGGCTCTGCT GCCAAACGCT ACGGATACCG ATTTCTTTAA CAAGGCAAAT GCAGAAAACA CCAAAATAAC CGACGAGCTA CAGGACCCCG TTATGGTTGC GAAAGCCGGT TATGACGCTC TTATGGCGGG TAAACCGAAG ATTGTACCAG GCGGACTGAA AAATAAATCG TACGAAGTAA TGGCGTATGT AGCCCCGCAG GAGGCACTGG CCGCGCTGAT GCGTGATAAG ATGTCGCAGA AGCCGGAGCC CGAAGAAAAG GAACCCATGA TTTCGCTTGC GTGGGGCATT GGCTTCGGTA TTGCCGTCAT TGCGGGTATT GCGCTGACAA TTGGCTATAA AAACGCCAGC CCTTACGACA AAGTACGGTA CAAATACAAA GCAAAATCGG CGAGCGACGC CCTGTCCAAC ACCTTGTCGT CGGTGTTCGA TAAAGTGGCC CATAGCGTTG TAGACGCCTA CCAGACCACC AAAGGCAAAG CAGAGAAGTT TGCCCATAAG GAAGAGGAAA TGCTGGAAGA TGCAACCGCC TAA
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Protein sequence | MNSETGKTAL ITGASSGIGQ ELAKLFAQDG YNLVLVGRSD EKLDRLGEVF KSNYGTDQVT VITKDLAQED AAQDVYNQVK AKGITVNVLV NDAGVGLYGL FATDTDWERE KSMIHLNVLS LTQMTKLFLY DMLARNEGKI LNLASLLSIT PSPLMAVYAG TKAYVYNFTQ SLVNELKDTN VSITALLPNA TDTDFFNKAN AENTKITDEL QDPVMVAKAG YDALMAGKPK IVPGGLKNKS YEVMAYVAPQ EALAALMRDK MSQKPEPEEK EPMISLAWGI GFGIAVIAGI ALTIGYKNAS PYDKVRYKYK AKSASDALSN TLSSVFDKVA HSVVDAYQTT KGKAEKFAHK EEEMLEDATA
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