More than 300 homologs were found in PanDaTox collection
for query gene Cpin_4294 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_4294  two component transcriptional regulator, LuxR family  100 
 
 		 218 aa  440  9.999999999999999e-123  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.81327  normal  0.0351026 
 
 
-
 
NC_013132  Cpin_0010  two component transcriptional regulator, LuxR family  40.65 
 
 		 219 aa  174  8e-43  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_6821  two component transcriptional regulator, LuxR family  40 
 
 		 225 aa  160  2e-38  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.121688  normal  0.121136 
 
 
-
 
NC_009441  Fjoh_2973  two component LuxR family transcriptional regulator  41.63 
 
 		 216 aa  155  6e-37  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1556  two component transcriptional regulator, LuxR family  36.87 
 
 		 222 aa  144  1e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_5845  two component transcriptional regulator, LuxR family  31.51 
 
 		 219 aa  136  3.0000000000000003e-31  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.715181 
 
 
-
 
NC_009441  Fjoh_0036  two component LuxR family transcriptional regulator  34.42 
 
 		 221 aa  135  6.0000000000000005e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0464925  n/a   
 
 
-
 
NC_013132  Cpin_5476  two component transcriptional regulator, LuxR family  33.64 
 
 		 219 aa  129  2.0000000000000002e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.21854 
 
 
-
 
NC_013037  Dfer_2963  two component transcriptional regulator, LuxR family  31.19 
 
 		 219 aa  130  2.0000000000000002e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  28.84 
 
 		 222 aa  110  2.0000000000000002e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  27.93 
 
 		 215 aa  109  3e-23  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  29.28 
 
 		 215 aa  106  3e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  27.03 
 
 		 215 aa  106  3e-22  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  31.78 
 
 		 218 aa  105  5e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  27.03 
 
 		 215 aa  105  5e-22  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  29.28 
 
 		 220 aa  105  5e-22  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  26.58 
 
 		 215 aa  103  1e-21  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  26.58 
 
 		 215 aa  103  1e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  26.58 
 
 		 215 aa  103  1e-21  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  26.58 
 
 		 215 aa  103  1e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  26.58 
 
 		 215 aa  103  1e-21  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  26.58 
 
 		 215 aa  103  2e-21  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.44 
 
 		 224 aa  103  2e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  32.52 
 
 		 206 aa  102  3e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  29.6 
 
 		 222 aa  102  6e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  27.43 
 
 		 228 aa  100  2e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  27.88 
 
 		 242 aa  100  2e-20  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  27.43 
 
 		 242 aa  99.4  3e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  31.16 
 
 		 207 aa  99.8  3e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  30.14 
 
 		 221 aa  99.8  3e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  29.02 
 
 		 234 aa  99.4  4e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  28.95 
 
 		 236 aa  99.4  4e-20  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  28.1 
 
 		 213 aa  99  5e-20  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  27.96 
 
 		 214 aa  98.6  7e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  28.44 
 
 		 234 aa  98.6  7e-20  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  29.44 
 
 		 223 aa  98.2  9e-20  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  30.52 
 
 		 224 aa  98.2  9e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_2258  two component LuxR family transcriptional regulator  28.21 
 
 		 254 aa  98.2  9e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00245701 
 
 
-
 
NC_013595  Sros_1446  response regulator receiver protein  29.76 
 
 		 209 aa  97.4  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0167897  normal  0.0778626 
 
 
-
 
NC_009523  RoseRS_1633  two component LuxR family transcriptional regulator  26.18 
 
 		 254 aa  96.7  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  28.95 
 
 		 226 aa  97.4  2e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_006274  BCZK3023  response regulator  32.87 
 
 		 597 aa  96.7  3e-19  Bacillus cereus E33L  Bacteria  decreased coverage  0.000011368  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  30 
 
 		 220 aa  96.3  3e-19  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  28.44 
 
 		 253 aa  96.7  3e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  31.05 
 
 		 218 aa  95.9  4e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  27.35 
 
 		 218 aa  95.9  4e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  30.99 
 
 		 212 aa  95.9  5e-19  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  28.11 
 
 		 213 aa  95.1  7e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  30.84 
 
 		 209 aa  95.1  7e-19  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  29.07 
 
 		 225 aa  95.1  7e-19  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  28.91 
 
 		 213 aa  94.7  8e-19  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  27.64 
 
 		 211 aa  94.7  8e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  29.2 
 
 		 217 aa  94.4  1e-18  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  29.33 
 
 		 228 aa  94.4  1e-18  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  30.14 
 
 		 213 aa  94.4  1e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  27.01 
 
 		 217 aa  94.7  1e-18  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_013730  Slin_6441  two component transcriptional regulator, LuxR family  30.8 
 
 		 213 aa  93.6  2e-18  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  29.28 
 
 		 250 aa  94  2e-18  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  30.14 
 
 		 208 aa  93.6  2e-18  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  27.6 
 
 		 218 aa  93.2  2e-18  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  26.89 
 
 		 206 aa  93.6  2e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  27.19 
 
 		 226 aa  93.2  3e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  25 
 
 		 211 aa  92.4  4e-18  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  27.83 
 
 		 213 aa  92.4  4e-18  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  28.11 
 
 		 218 aa  92.4  4e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3409  two component transcriptional regulator, LuxR family  25.36 
 
 		 221 aa  92.8  4e-18  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000306896  hitchhiker  0.000114505 
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  27.83 
 
 		 209 aa  92.4  5e-18  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  27.83 
 
 		 209 aa  92.4  5e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  27.83 
 
 		 209 aa  92.4  5e-18  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  27.83 
 
 		 209 aa  92.4  5e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  27.83 
 
 		 209 aa  92.4  5e-18  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  26.19 
 
 		 213 aa  92.4  5e-18  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013132  Cpin_1732  two component transcriptional regulator, LuxR family  29.28 
 
 		 211 aa  92.4  5e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  25.91 
 
 		 232 aa  92  6e-18  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  26.54 
 
 		 213 aa  92  6e-18  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009483  Gura_0759  two component LuxR family transcriptional regulator  27.31 
 
 		 217 aa  92  6e-18  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  26.54 
 
 		 213 aa  92  6e-18  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  27.7 
 
 		 227 aa  91.7  7e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  31.63 
 
 		 209 aa  92  7e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  27.1 
 
 		 226 aa  91.3  9e-18  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  26.89 
 
 		 208 aa  91.3  9e-18  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  28.86 
 
 		 216 aa  91.3  1e-17  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  27.85 
 
 		 216 aa  90.9  1e-17  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  29.63 
 
 		 222 aa  90.9  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  29.09 
 
 		 238 aa  90.9  1e-17  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_012917  PC1_2406  transcriptional regulator NarP  34.45 
 
 		 210 aa  90.9  1e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  29.91 
 
 		 217 aa  91.3  1e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  26.75 
 
 		 221 aa  90.5  2e-17  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_014210  Ndas_4366  two component transcriptional regulator, LuxR family  28.29 
 
 		 225 aa  90.5  2e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  29.85 
 
 		 208 aa  90.1  2e-17  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_013525  Tter_0641  two component transcriptional regulator, LuxR family  27.27 
 
 		 1648 aa  90.5  2e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  24.77 
 
 		 212 aa  90.5  2e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  28.7 
 
 		 219 aa  90.5  2e-17  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  25.91 
 
 		 232 aa  90.5  2e-17  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013595  Sros_3519  response regulator receiver protein  29.33 
 
 		 220 aa  90.5  2e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  28.97 
 
 		 226 aa  89.7  3e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  26.64 
 
 		 213 aa  89.7  3e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  25.98 
 
 		 220 aa  90.1  3e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  28.7 
 
 		 232 aa  89.7  3e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  29.27 
 
 		 218 aa  89.7  3e-17  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
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