Gene Ndas_4366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4366 
Symbol 
ID9248241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5200632 
End bp5201309 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content74% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003682261 
Protein GI297563287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTG TTTCGGTCCT GATCGTCGAC GACCAGATCC TGATGCGGCA GGGCCTGCGC 
AAACTGCTGG AGATCGAGGA GGGCGTCGAC GTCGTCGGCG ACGCCGCGGA CGGCGTCGAG
GCCCTGGAGT TCCTCTCGGC CGCCGACCCG CTCCCGGACG TGGCCCTGGT GGACGCCCGC
ATGCCGCGCA TGGACGGGGT GGCCCTCATC GGGCGGATGC GCGCGGAGTA CCCGGACGTG
CCCGCCCTGG TGCTGACCAC GTTCGACGAC GACGAACTGG TCTTCGGCGG TCTGCGGGCC
GGAGCGCGCG GCTACCTGCT CAAGGACGTG CCGCCGGAGG AACTGGTGGC GGCGATCCGC
CGCGTCGCCC GGGGTGAGAC CGTTCTCGGC GGTCCGGCGG CCGAGCTCCT GGTCGCCGCG
CTCGGCGAAG GCCCCTCCAC CGTCCCCGCG GCGGACCCGC CCCGCCCGCC AGGGCACGGG
GAGGCGCCCC GGTTGTCGGA GCGCGAGGAG GAGGTGGCCC GCCTCGTCGG CACGGGCGCC
ACCAACCGGG AGGTCGCGCG TGCCCTGTTC ATCACCGAGG GCACCGCCAA GAACCACGTC
ACGAGCATCC TGCGCAAGCT GGGGCTGCGC GACCGCACCC GGCTCGCCCT GTGGGTACGG
GAGCGCCGGG GCGGCTAG
 
Protein sequence
MTTVSVLIVD DQILMRQGLR KLLEIEEGVD VVGDAADGVE ALEFLSAADP LPDVALVDAR 
MPRMDGVALI GRMRAEYPDV PALVLTTFDD DELVFGGLRA GARGYLLKDV PPEELVAAIR
RVARGETVLG GPAAELLVAA LGEGPSTVPA ADPPRPPGHG EAPRLSEREE EVARLVGTGA
TNREVARALF ITEGTAKNHV TSILRKLGLR DRTRLALWVR ERRGG