Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4366 |
Symbol | |
ID | 9248241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5200632 |
End bp | 5201309 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003682261 |
Protein GI | 297563287 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTG TTTCGGTCCT GATCGTCGAC GACCAGATCC TGATGCGGCA GGGCCTGCGC AAACTGCTGG AGATCGAGGA GGGCGTCGAC GTCGTCGGCG ACGCCGCGGA CGGCGTCGAG GCCCTGGAGT TCCTCTCGGC CGCCGACCCG CTCCCGGACG TGGCCCTGGT GGACGCCCGC ATGCCGCGCA TGGACGGGGT GGCCCTCATC GGGCGGATGC GCGCGGAGTA CCCGGACGTG CCCGCCCTGG TGCTGACCAC GTTCGACGAC GACGAACTGG TCTTCGGCGG TCTGCGGGCC GGAGCGCGCG GCTACCTGCT CAAGGACGTG CCGCCGGAGG AACTGGTGGC GGCGATCCGC CGCGTCGCCC GGGGTGAGAC CGTTCTCGGC GGTCCGGCGG CCGAGCTCCT GGTCGCCGCG CTCGGCGAAG GCCCCTCCAC CGTCCCCGCG GCGGACCCGC CCCGCCCGCC AGGGCACGGG GAGGCGCCCC GGTTGTCGGA GCGCGAGGAG GAGGTGGCCC GCCTCGTCGG CACGGGCGCC ACCAACCGGG AGGTCGCGCG TGCCCTGTTC ATCACCGAGG GCACCGCCAA GAACCACGTC ACGAGCATCC TGCGCAAGCT GGGGCTGCGC GACCGCACCC GGCTCGCCCT GTGGGTACGG GAGCGCCGGG GCGGCTAG
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Protein sequence | MTTVSVLIVD DQILMRQGLR KLLEIEEGVD VVGDAADGVE ALEFLSAADP LPDVALVDAR MPRMDGVALI GRMRAEYPDV PALVLTTFDD DELVFGGLRA GARGYLLKDV PPEELVAAIR RVARGETVLG GPAAELLVAA LGEGPSTVPA ADPPRPPGHG EAPRLSEREE EVARLVGTGA TNREVARALF ITEGTAKNHV TSILRKLGLR DRTRLALWVR ERRGG
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