| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4294 |
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| Symbol | |
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| ID | 8360467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5355975 |
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| End bp | 5356631 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644966456 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003123944 |
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| Protein GI | 256423291 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.81327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0351026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTG ATATGAAAAT AAAAATAGGT ATTACAGATG ATCAGCAGCT TTTTCTAAAG
TCCTTAACGG CCTTGGTAAA CACTTTTACG TCCTTTGAGG TAATTGTGGA TGCATTGAAT
GGAGAAGATC TGATAGAGAA GTTAGGCACC CTGGATGAAT TACCTGATAT TATATTGGTT
GACGTGAACA TGCCGGTCAT GGATGGCGCA GAAACCGTTC GTTATGTATC GGCTAATTAT
CCCTTGATTA AACTGGTGGC ACTATCAGTA AAGGATGATG ATCTTACTAT CATTAACATG
ATTAAAGCGG GAGGATGTGC CTACCTGCTG AAAGATATAC ACCCCAATGA GCTGGAGAGA
GCTTTATTGG AAATACAGGA GAAGGGTATT TACAATGGCG ATGCATTTAA TATTAACTAC
CGGCGTATAC TGATTGCACA GCAACAAATG AAAGACGGCT TGCGGGTGAC AGATAAAGAG
AAAGATTTTT TACAGCTGGC CTGTAGTGAC TTAACATATA AACAGATTGC GGCGAAAATG
AAGTTGTCAG AGCGGACAAT TGATGGATAC AGGGAATCCC TTTTTATGAA ACTGAATGTT
CAGAGTCGGG TGGGAATGGT AATGGAAGCT ATCAGAAAGA ATTATATAGC TATATAA
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| Protein sequence | MSIDMKIKIG ITDDQQLFLK SLTALVNTFT SFEVIVDALN GEDLIEKLGT LDELPDIILV
DVNMPVMDGA ETVRYVSANY PLIKLVALSV KDDDLTIINM IKAGGCAYLL KDIHPNELER
ALLEIQEKGI YNGDAFNINY RRILIAQQQM KDGLRVTDKE KDFLQLACSD LTYKQIAAKM
KLSERTIDGY RESLFMKLNV QSRVGMVMEA IRKNYIAI
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