More than 300 homologs were found in PanDaTox collection
for query gene Bcen2424_4784 on replicon NC_008543
Organism: Burkholderia cenocepacia HI2424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010515  Bcenmc03_5499  short-chain dehydrogenase/reductase SDR  100 
 
 
263 aa  510  1e-144  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.526746 
 
 
-
 
NC_008061  Bcen_3583  short-chain dehydrogenase/reductase SDR  100 
 
 
263 aa  510  1e-144  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4784  short-chain dehydrogenase/reductase SDR  100 
 
 
263 aa  510  1e-144  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0533627  normal 
 
 
-
 
NC_007511  Bcep18194_B0928  Short-chain dehydrogenase/reductase SDR  94.3 
 
 
263 aa  483  1e-135  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4169  short-chain dehydrogenase/reductase SDR  92.4 
 
 
263 aa  452  1.0000000000000001e-126  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4691  short-chain dehydrogenase/reductase SDR  92.4 
 
 
263 aa  451  1.0000000000000001e-126  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3816  short-chain dehydrogenase/reductase SDR  90.23 
 
 
263 aa  445  1.0000000000000001e-124  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.000362562 
 
 
-
 
NC_009832  Spro_0621  short-chain dehydrogenase/reductase SDR  62.45 
 
 
260 aa  301  7.000000000000001e-81  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2660  short chain dehydrogenase/reductase family oxidoreductase  54.92 
 
 
265 aa  226  2e-58  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0060  short chain dehydrogenase/reductase family oxidoreductase  55.33 
 
 
265 aa  227  2e-58  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0276  short chain dehydrogenase/reductase family oxidoreductase  55.33 
 
 
265 aa  227  2e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1834  short chain dehydrogenase/reductase family oxidoreductase  54.92 
 
 
265 aa  226  2e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3293  short chain dehydrogenase/reductase family oxidoreductase  54.92 
 
 
265 aa  226  2e-58  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0061  short chain dehydrogenase/reductase family oxidoreductase  55.33 
 
 
265 aa  227  2e-58  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2718  short chain dehydrogenase/reductase family oxidoreductase  54.92 
 
 
265 aa  226  2e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  0.987869  n/a   
 
 
-
 
NC_007651  BTH_I0053  short chain dehydrogenase/reductase family oxidoreductase  54.51 
 
 
265 aa  224  8e-58  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4447  short-chain dehydrogenase/reductase SDR  50.83 
 
 
262 aa  219  3e-56  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.052373 
 
 
-
 
NC_009511  Swit_4351  short-chain dehydrogenase/reductase SDR  41.67 
 
 
268 aa  172  5.999999999999999e-42  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.48902 
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  39.29 
 
 
254 aa  169  5e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  38.89 
 
 
254 aa  166  2.9999999999999998e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  39.68 
 
 
254 aa  154  1e-36  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  40.32 
 
 
254 aa  152  7e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0512  short-chain dehydrogenase/reductase SDR  36.44 
 
 
248 aa  143  2e-33  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2581  short chain dehydrogenase  35.18 
 
 
263 aa  142  6e-33  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_3656  short chain dehydrogenase  35.57 
 
 
263 aa  142  7e-33  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_02326  short chain dehydrogenase  35.57 
 
 
263 aa  141  9.999999999999999e-33  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1235  short-chain dehydrogenase/reductase SDR  35.18 
 
 
263 aa  141  9.999999999999999e-33  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E2798  short chain dehydrogenase  35.18 
 
 
263 aa  141  9.999999999999999e-33  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2562  short chain dehydrogenase  35.18 
 
 
263 aa  141  9.999999999999999e-33  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02287  hypothetical protein  35.57 
 
 
263 aa  141  9.999999999999999e-33  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1253  short chain dehydrogenase  35.18 
 
 
263 aa  141  9.999999999999999e-33  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0560735 
 
 
-
 
NC_008541  Arth_1790  short-chain dehydrogenase/reductase SDR  35.8 
 
 
255 aa  141  9.999999999999999e-33  Arthrobacter sp. FB24  Bacteria  normal  0.0755029  n/a   
 
 
-
 
NC_009801  EcE24377A_2712  short chain dehydrogenase  35.18 
 
 
263 aa  141  9.999999999999999e-33  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2063  short-chain dehydrogenase/reductase SDR  35.86 
 
 
251 aa  140  1.9999999999999998e-32  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0620  3-oxoacyl-[acyl-carrier-protein] reductase  37.7 
 
 
250 aa  139  4.999999999999999e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.890979 
 
 
-
 
NC_011083  SeHA_C2705  short chain dehydrogenase  35.18 
 
 
263 aa  138  7.999999999999999e-32  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.856225  normal 
 
 
-
 
NC_011094  SeSA_A2681  short chain dehydrogenase  35.18 
 
 
263 aa  138  7.999999999999999e-32  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2590  short chain dehydrogenase  35.18 
 
 
263 aa  138  7.999999999999999e-32  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2811  short chain dehydrogenase  35.18 
 
 
263 aa  138  7.999999999999999e-32  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2639  short chain dehydrogenase  35.18 
 
 
263 aa  138  7.999999999999999e-32  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4826  short-chain dehydrogenase/reductase SDR  39.75 
 
 
244 aa  136  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  normal  0.806753 
 
 
-
 
NC_009954  Cmaq_1409  aldose dehydrogenase  35.51 
 
 
258 aa  135  5e-31  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_008752  Aave_1551  short-chain dehydrogenase/reductase SDR  37.6 
 
 
270 aa  135  5e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.2513  normal  0.363007 
 
 
-
 
NC_010511  M446_6244  short-chain dehydrogenase/reductase SDR  38.96 
 
 
252 aa  135  6.0000000000000005e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.240811 
 
 
-
 
NC_009485  BBta_5100  putative short-chain dehydrogenase/reductase SDR family protein  35.6 
 
 
261 aa  134  9.999999999999999e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.917841  normal  0.678944 
 
 
-
 
NC_009621  Smed_5843  short-chain dehydrogenase/reductase SDR  35.94 
 
 
261 aa  134  1.9999999999999998e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.861263  normal 
 
 
-
 
NC_008752  Aave_1220  short chain dehydrogenase  39.61 
 
 
254 aa  134  1.9999999999999998e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0140677 
 
 
-
 
NC_008789  Hhal_1323  short-chain dehydrogenase/reductase SDR  36.76 
 
 
254 aa  133  3e-30  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1193  short chain dehydrogenase/reductase family oxidoreductase  36.19 
 
 
252 aa  133  3e-30  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0426  Short-chain dehydrogenase/reductase SDR  33.2 
 
 
253 aa  133  3e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.0324644 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  36.86 
 
 
258 aa  133  3e-30  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_010681  Bphyt_2411  3-hydroxybutyrate dehydrogenase  33.86 
 
 
260 aa  133  3.9999999999999996e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  0.520745  normal  0.812558 
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  35.63 
 
 
246 aa  132  3.9999999999999996e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_009656  PSPA7_3469  putative short-chain dehydrogenase  37.21 
 
 
252 aa  132  5e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2131  short-chain dehydrogenase/reductase SDR  34.15 
 
 
262 aa  132  5e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3002  short-chain dehydrogenase/reductase SDR  37.74 
 
 
266 aa  132  6e-30  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.00000526062 
 
 
-
 
NC_012669  Bcav_2700  short-chain dehydrogenase/reductase SDR  40.86 
 
 
268 aa  132  7.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.657901 
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  36.07 
 
 
247 aa  132  7.999999999999999e-30  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_011004  Rpal_0113  short-chain dehydrogenase/reductase SDR  35.89 
 
 
262 aa  132  7.999999999999999e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.351696  n/a   
 
 
-
 
NC_011004  Rpal_4152  short-chain dehydrogenase/reductase SDR  37.4 
 
 
257 aa  132  7.999999999999999e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3206  short-chain dehydrogenase/reductase SDR  35.46 
 
 
255 aa  131  1.0000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0631  short-chain dehydrogenase/reductase SDR  39.69 
 
 
265 aa  131  1.0000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.76513  n/a   
 
 
-
 
NC_010557  BamMC406_5564  3-hydroxybutyrate dehydrogenase  35.06 
 
 
260 aa  131  1.0000000000000001e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0311  Short-chain dehydrogenase/reductase SDR  34.41 
 
 
262 aa  130  2.0000000000000002e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2264  Short-chain dehydrogenase/reductase SDR  35.46 
 
 
255 aa  130  2.0000000000000002e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.136651  normal 
 
 
-
 
NC_010681  Bphyt_1098  short-chain dehydrogenase/reductase SDR  35.95 
 
 
249 aa  130  2.0000000000000002e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  32.1 
 
 
269 aa  130  2.0000000000000002e-29  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_010725  Mpop_0321  short-chain dehydrogenase/reductase SDR  35.97 
 
 
254 aa  130  2.0000000000000002e-29  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1861  short-chain dehydrogenase/reductase SDR  36.4 
 
 
268 aa  130  2.0000000000000002e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.651686  normal  0.848972 
 
 
-
 
NC_011369  Rleg2_2860  3-hydroxybutyrate dehydrogenase  32.94 
 
 
258 aa  129  4.0000000000000003e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0187623  normal  0.981149 
 
 
-
 
NC_007948  Bpro_4205  short chain dehydrogenase  34.26 
 
 
249 aa  129  4.0000000000000003e-29  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  30.89 
 
 
248 aa  129  5.0000000000000004e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_011663  Sbal223_0890  short chain dehydrogenase  36.15 
 
 
254 aa  129  5.0000000000000004e-29  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1752  short chain dehydrogenase  39.44 
 
 
254 aa  129  6e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2493  short-chain dehydrogenase/reductase SDR  36.54 
 
 
253 aa  129  6e-29  Chelativorans sp. BNC1  Bacteria  normal  0.0816082  n/a   
 
 
-
 
NC_009511  Swit_3324  short-chain dehydrogenase/reductase SDR  39 
 
 
248 aa  129  6e-29  Sphingomonas wittichii RW1  Bacteria  normal  0.057049  hitchhiker  0.000702749 
 
 
-
 
NC_009052  Sbal_3471  short chain dehydrogenase  36.15 
 
 
254 aa  129  6e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3738  short-chain dehydrogenase/reductase SDR  36.4 
 
 
253 aa  129  7.000000000000001e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4211  short-chain dehydrogenase/reductase SDR  39.13 
 
 
274 aa  128  8.000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0442  short-chain dehydrogenase/reductase SDR  30.89 
 
 
253 aa  128  9.000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013457  VEA_000395  3-oxoacyl-[acyl-carrier protein] reductase  34 
 
 
252 aa  128  9.000000000000001e-29  Vibrio sp. Ex25  Bacteria  normal  0.36672  n/a   
 
 
-
 
NC_009665  Shew185_0865  short chain dehydrogenase  36.15 
 
 
254 aa  128  1.0000000000000001e-28  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1518  short chain dehydrogenase  37.2 
 
 
254 aa  128  1.0000000000000001e-28  Marinomonas sp. MWYL1  Bacteria  normal  0.570528  normal  0.0138518 
 
 
-
 
NC_010625  Bphy_6809  short-chain dehydrogenase/reductase SDR  35.02 
 
 
254 aa  127  1.0000000000000001e-28  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0934  3-oxoacyl-[acyl-carrier-protein] reductase  31.2 
 
 
247 aa  128  1.0000000000000001e-28  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00491532  n/a   
 
 
-
 
NC_011898  Ccel_1173  short-chain dehydrogenase/reductase SDR  32.55 
 
 
256 aa  127  1.0000000000000001e-28  Clostridium cellulolyticum H10  Bacteria  normal  0.0283651  n/a   
 
 
-
 
NC_011369  Rleg2_2039  short chain dehydrogenase  36.68 
 
 
255 aa  127  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0111409  normal 
 
 
-
 
NC_013131  Caci_3549  short-chain dehydrogenase/reductase SDR  32.31 
 
 
261 aa  127  2.0000000000000002e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.32556  normal 
 
 
-
 
NC_009441  Fjoh_4007  short-chain dehydrogenase/reductase SDR  27.38 
 
 
247 aa  127  2.0000000000000002e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  0.466284  n/a   
 
 
-
 
NC_012850  Rleg_3132  3-hydroxybutyrate dehydrogenase  32.14 
 
 
258 aa  126  3e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0908587  normal 
 
 
-
 
NC_009338  Mflv_4505  short-chain dehydrogenase/reductase SDR  36.89 
 
 
260 aa  126  3e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2554  short-chain dehydrogenase/reductase SDR  35.32 
 
 
258 aa  126  3e-28  Meiothermus ruber DSM 1279  Bacteria  normal  0.465274  normal 
 
 
-
 
NC_011071  Smal_2771  short chain dehydrogenase  38.65 
 
 
253 aa  126  3e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2690  short chain dehydrogenase  36.11 
 
 
255 aa  126  3e-28  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3705  short-chain dehydrogenase/reductase SDR  35.06 
 
 
255 aa  126  4.0000000000000003e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.551214  n/a   
 
 
-
 
NC_009486  Tpet_0594  short-chain dehydrogenase/reductase SDR  34.39 
 
 
251 aa  126  4.0000000000000003e-28  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000426585  n/a   
 
 
-
 
NC_012852  Rleg_6202  3-hydroxybutyrate dehydrogenase  32.4 
 
 
260 aa  126  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.554491 
 
 
-
 
NC_010483  TRQ2_0608  short-chain dehydrogenase/reductase SDR  34.39 
 
 
251 aa  126  4.0000000000000003e-28  Thermotoga sp. RQ2  Bacteria  normal  0.236394  n/a   
 
 
-
 
NC_009512  Pput_2971  short-chain dehydrogenase/reductase SDR  35.6 
 
 
254 aa  126  4.0000000000000003e-28  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0178  short-chain dehydrogenase/reductase SDR  35.6 
 
 
247 aa  126  4.0000000000000003e-28  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000108862  hitchhiker  0.000102827 
 
 
-
 
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