| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1752 |
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| Symbol | |
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| ID | 5455170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1897118 |
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| End bp | 1897882 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877327 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001413028 |
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| Protein GI | 154252204 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTGC TCGACGGGAA AATCGCCATT GTCACGGGCG CGAGCTCCGG TATCGGCCGC
GCGGCGGCGC TGCTCTTCGC GCAGGAAGGG GCAAGCCTCG TCGTCACAGC GCGACGCAAG
GCGGAGCTTG ATGCGCTTGT TGCCGAAATA ACAGCGCAAG GCGGCGAAGC GGTCGCTCTT
GCGGGCGATA TATGCGACGA AACGCTTGCT GTGCGCCTTG TCGCGCTTGC GACGGACCGT
TTTGGAGGTC TCGACATTGC CTTCAACAAT GCCGCCACCA CGGGTAGCCT TCTTTCCACG
GTCGAGATTC CTCTTGCGGA CTGGCGGCTC ACCCTCGACA CCAATCTCAC TGCCGCCTTC
ATGGGCGCGC AGGCGCAACT CCCCGCCATG CTCGCGCGCG GCGGCGGTTC GCTCATCTTC
ACCTCCACCA TTGTCGGTCA CGAGCTCGGC CTTCCCGGCA TGGCGGCCTA TGCGTCGAGC
AAGGCAGGGC TCGTCGGTCT CGCACGTGTC ATAGCCGCCG AATATGGTGC GAAGGGCATC
CGCGCCAATG CGCTCCTCCC CGGTGGCACG GACACGCCGA TGGGCCGCGA TGCCGCGCCA
ACGCCGGAGG CGCTGTCCTT TGTCGTCGGG TTGCACGCTC TGAAGCGCAT TGCCCAGCCA
GAAGAAATTG CCCGTGCCGC CCTCTTCCTT GCCTCGGATG CCTCCAGCTT CGTGACCGGC
AGCGCCCTCC TCGCCGATGG CGGTGTCTCG ATCAACAGAG CGTAA
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| Protein sequence | MGLLDGKIAI VTGASSGIGR AAALLFAQEG ASLVVTARRK AELDALVAEI TAQGGEAVAL
AGDICDETLA VRLVALATDR FGGLDIAFNN AATTGSLLST VEIPLADWRL TLDTNLTAAF
MGAQAQLPAM LARGGGSLIF TSTIVGHELG LPGMAAYASS KAGLVGLARV IAAEYGAKGI
RANALLPGGT DTPMGRDAAP TPEALSFVVG LHALKRIAQP EEIARAALFL ASDASSFVTG
SALLADGGVS INRA
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