| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4784 |
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| Symbol | |
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| ID | 4453613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1771481 |
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| End bp | 1772272 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639696840 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_838411 |
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| Protein GI | 116692878 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0533627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACC CGCCACCCCG CACGATCGCG ATCACCGGCG CAGGCACCGG CATCGGCGCC
GCATGCGCAC GCCGCTTCGC CCGTCGCGGC GACCGCGTCG TGCTGATCGG GCGCCGCCAG
GCGCCGCTCG ATGCACTGGC TGCCGAGACG GGCGGCCTCG CGCTGGCCGG CGACGCGGCG
AGCCCCGCCG ACTGGGCCGG CTTCGTGCAG CGCATCGCCG AACGCTTCGG CCGCGTCGAC
GCGCTCGTCG CGTGTGCGGG CGGCCACGGC ATCGGCCGCG CGGACGAAAC CGACGACGCG
CAATGGCGCG ACGCGATGCA CGCGAACCTC GACACCGCGT TCGTCAGCGC GCGTGCGTGC
CTGCCCGACC TGATCGCGCA GCGCGGCAAT ATCGTGCTGG TCGCGTCGAT CGCGGCGCTC
GCGGCCGGCC CCGGCGTATG CGGCTACACG GTCGGCAAGC ACGCACTGCT CGGGCTGGCG
CGATCGCTCG CGCGCGACTA CGGTCCGCAC GGCGTACGGG CGAACGCCGT CTGCCCGGGC
TGGGTCCGCA CGCCGATGGC CGATGCGGAA ATGGCCCCGC TGATGGCCGC GCACGACGAT
TCGCTCGACG GCGCGTACGC CCGCGTGAGC GCCGACGTGC CGCTGCGGCG CGCGGCCGAT
CCCGACGAGA TCGCGGCCGT CTGCGCGTTC CTGGCGTCGC CGGACGCATC GTTCGTGACC
GGCGCGACGC TCGTCGCGGA CGGCGGCGCG ATGGTCGTCG ACGTGCCGAC GCTCGCGTTC
GACCGGCTTT GA
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| Protein sequence | MTHPPPRTIA ITGAGTGIGA ACARRFARRG DRVVLIGRRQ APLDALAAET GGLALAGDAA
SPADWAGFVQ RIAERFGRVD ALVACAGGHG IGRADETDDA QWRDAMHANL DTAFVSARAC
LPDLIAQRGN IVLVASIAAL AAGPGVCGYT VGKHALLGLA RSLARDYGPH GVRANAVCPG
WVRTPMADAE MAPLMAAHDD SLDGAYARVS ADVPLRRAAD PDEIAAVCAF LASPDASFVT
GATLVADGGA MVVDVPTLAF DRL
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