| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3324 |
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| Symbol | |
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| ID | 5197649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3656703 |
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| End bp | 3657449 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640582869 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263808 |
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| Protein GI | 148556226 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.057049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000702749 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGAGAT TCGAGGGGCG GGTCGTGCTG GTGACCGGGG CGGCGTCGGG GATCGGCCGC
GCCACCGCGT TGCGGCTGGC CGAGGAAGGC GCGCGCCTGC TGTGCGTCGA CGTCAACGGC
GACGGCGCCG AGGCGACCGC GAAGGCGGTG CCGGACGGCG CGGCGATGCG GGTCGACGTC
GCCGACGCGG CGGCGTGCGA CGCGGCGGTG GCGGAGGCGG GCCGGCGCTT CGGCCGGCTC
GACGGGCTCG CCAACGTCGC CGGGGTCGGC AGCTTCGGCC ATGCCGCCGC GACCAGCGAC
GCCGAATGGC AGCGCGTGAT CGGCATCAAC CTGACCGGCG TGTTCCAGAT GACCCGCGCG
GCGCTGCCCG CGCTCGAGGC GGCGAACGGC GCGATCGTCA ACATCGCCAG CGCGGCGGGG
CTGGTCGCGA CCCCCTATGC CGCGGCCTAT TCGGCGTCGA AGAGCGGCGT CGTCGGCCTC
ACCCGGTCGG TCGCGGCCGA ATATGCGCGG CGCGGGGTGC GGGTGAACGC GATCTGCCCC
GGCGCGGTCG ACACCCCGCT GATCGCCGGC GGCTTCGATG CGATCGACGG GGTCGACATG
GACCTGTTCG GCCGGATGAC CCCGCTGATC GGCCCGACCG CCCGGCCCGA GGACGTCGCG
GCGGCGGTGG CCTTCCTGCT GTCGGACGAC GCGCGCTTCA TCACCGGCGC CACCCTGGCG
GTGGACGGCG GCCAGACCGC GATCTGA
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| Protein sequence | MRRFEGRVVL VTGAASGIGR ATALRLAEEG ARLLCVDVNG DGAEATAKAV PDGAAMRVDV
ADAAACDAAV AEAGRRFGRL DGLANVAGVG SFGHAAATSD AEWQRVIGIN LTGVFQMTRA
ALPALEAANG AIVNIASAAG LVATPYAAAY SASKSGVVGL TRSVAAEYAR RGVRVNAICP
GAVDTPLIAG GFDAIDGVDM DLFGRMTPLI GPTARPEDVA AAVAFLLSDD ARFITGATLA
VDGGQTAI
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