| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4691 |
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| Symbol | |
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| ID | 6180365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1811547 |
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| End bp | 1812338 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641684450 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811361 |
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| Protein GI | 172063710 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACC CGCAACCCCG AACGATCGCG ATCACCGGCG CAGGCACCGG CATCGGCGCC
GCGTGCGCGC GCCGCTTCGC CGCCCGCGGC GAGCGCGTCG TGTTGATCGG ACGACGCCGG
CCACCGCTCG ACGCGCTCGC CGCCGAGACG GGCGGCCTCG CCCTCGCCGG CGACGCCGCG
AGCACGGCCG ACTGGGCCCG CTTCCTGCCG GAGATCGCCA AACGGTTCGG CCCGGTCGAC
GCGCTCGTCG CGTGCGCGGG CGGCCACGGC CTCGGCCGCG CGGACGAAAC CGACGACGCG
CAATGGCGCG ACGCGATGCA CGCGAATCTC GACACCGCAT TCGTCAGCGC ACGCGCGTGC
CTGCCCGACC TGATCGCGCA GCGCGGCAGC ATCGTGCTGG TCGCGTCGAT CGCCGCGCTC
GCCGCCGGGC CGGGCGCGTG CGGCTATACG GTCGGCAAGC ACGCGCTGCT CGGGCTCGCG
CGTTCGCTCG CACGCGACTA CGGGCCGCAC GGCGTGCGTG CGAACGCGGT GTGCCCGGGC
TGGGTCCGCA CGCCGATGGC CGATGCGGAA ATGGCGCCGC TGATGTCCGC GTATGGCGAC
ACGCTCGACG GCGCGTATGC CCGTGTGAGC GCCGACGTGC CGCTGCGGCG CGCGGCCGAT
CCGGACGAAA TCGCGGCCGT GTGCGCATTC CTCGCATCCC CCGACGCGTC GTTCGTGACG
GGCGCGACGC TCGTCGCCGA TGGCGGCGCG ATGGTCGTCG ATGTGCCGAC GCTCGCGTTC
GACAAGCTTT GA
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| Protein sequence | MTHPQPRTIA ITGAGTGIGA ACARRFAARG ERVVLIGRRR PPLDALAAET GGLALAGDAA
STADWARFLP EIAKRFGPVD ALVACAGGHG LGRADETDDA QWRDAMHANL DTAFVSARAC
LPDLIAQRGS IVLVASIAAL AAGPGACGYT VGKHALLGLA RSLARDYGPH GVRANAVCPG
WVRTPMADAE MAPLMSAYGD TLDGAYARVS ADVPLRRAAD PDEIAAVCAF LASPDASFVT
GATLVADGGA MVVDVPTLAF DKL
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