| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3656 |
|---|
| Symbol | ucpA |
|---|
| ID | 6970065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3371234 |
|---|
| End bp | 3372025 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643387450 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002271903 |
|---|
| Protein GI | 209397809 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAAC TCACGGGCAA GACAGCACTG ATTACGGGCG CATTGCAGGG AATTGGCGAA
GGAATTGCCA GAACTTTTGC GCGTCATGGC GCAAACCTAA TCTTGCTGGA TATCTCCCCT
GAGATCGAAA AGCTGGCGGA CGAACTGTGT GGTCGTGGTC ATCGCTGTAC GGCGGTTGTC
GCCGATGTGC GTGACCCGGC GTCGGTAGCC GCAGCTATCA AACGCGCGAA GGAAAAAGAA
GGGCGCATTG ATATCCTGGT GAATAACGCA GGCGTTTGTC GTCTGGGCAG TTTCCTCGAT
ATGAGCGATG ACGATCGCGA TTTCCATATT GACATCAATA TTAAAGGCGT ATGGAACGTC
ACGAAGGCGG TGCTGCCGGA GATGATTGCC CGCAAAGATG GTCGCATTGT GATGATGTCT
TCAGTCACTG GTGATATGGT GGCCGATCCG GGTGAAACGG CGTACGCCTT AACGAAAGCG
GCGATTGTTG GCCTGACAAA ATCGCTGGCG GTGGAGTATG CGCAGTCTGG TATTCGCGTT
AACGCCATAT GCCCTGGATA CGTTCGCACA CCAATGGCGG AAAGCATTGC CCGCCAGTCG
AACCCGGAAG ATCCAGAGTC GGTGCTGACT GAAATGGCAA AAGCAATCCC GCTGCGTCGC
CTCGCCGATC CGCTGGAAGT CGGCGAACTG GCGGCCTTCC TCGCATCGGA TGAATCCAGC
TATTTAACCG GTACACAGAA TGTGATTGAT GGCGGCAGCA CACTGCCGGA GACGGTTAGC
GTCGGTATCT GA
|
|---|
| Protein sequence | MGKLTGKTAL ITGALQGIGE GIARTFARHG ANLILLDISP EIEKLADELC GRGHRCTAVV
ADVRDPASVA AAIKRAKEKE GRIDILVNNA GVCRLGSFLD MSDDDRDFHI DINIKGVWNV
TKAVLPEMIA RKDGRIVMMS SVTGDMVADP GETAYALTKA AIVGLTKSLA VEYAQSGIRV
NAICPGYVRT PMAESIARQS NPEDPESVLT EMAKAIPLRR LADPLEVGEL AAFLASDESS
YLTGTQNVID GGSTLPETVS VGI
|
|---|
| |