Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4447 |
Symbol | |
ID | 6977541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 80452 |
End bp | 81240 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643393625 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002278443 |
Protein GI | 209546525 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.052373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCA GCAAGAAGAC GGCGCTGATC ACCGGCGGCG GCACGGGCAT CGGCGCCGCA GTCGCCCGGC GCATCCGTCG GGAAGGCGGC AATGTCGCGC TCGTCGGACG GCGCCCCGAA CCGCTTCGCG CCGTTGCCGA TGAGATCGGC GCCACAGTCA TCGCCGCCGA CGCGGCCGAT GGCATTGCGA TGCGGAAAGC AATCGAAACG GTCGTCGAGA CTTTCGGCGG GCTCGATATC CTGATTGCCA ATGCCGGCGG CCACGGTGTC GGGCCGACGA TCAGCATGTC CGATGAGACC TGGGATCTCG CGGTTCGGCT CAATTTGAAT ACTGCTTTCG TCAGCGCCCG CGAATCTCTC CCCCATCTGA TCAAGAACAA GGGCAATATC ATTGTTCTCG CCTCCATTGC CGGGCTCTTT GCCGGGCCGG ACGCGGCGGG CTACGTCACC ACGAAGCATG CCTGCATCGG GCTCGCGAAA TCGCTGGCGC GCGACTACGG CCGTAAGGGC GTGCGCACCA ACACGGTCTG CCCGGGATGG GTGACGACTG ACATGGCCGA CGAGCAGATG CAGATGATCG TCGAGAAGTT CAGGCTGAAG AGCATCGAAG AGGCCTATGC GCTCGTCACC AAGGACGTGC CGCTCGGTCG CCCCGCGAGC GCCGAGGATG TCGCCAACGC CGTCTGCTTC CTGGCCTCGT CGGACGCCTC GATGATCAAC GGCGCGATCC TGACCGTCGA CGGCGGAGCC GGCACAGTCG ATCTGCCGAC CCTCGCCTTT GCAGAATGA
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Protein sequence | MRFSKKTALI TGGGTGIGAA VARRIRREGG NVALVGRRPE PLRAVADEIG ATVIAADAAD GIAMRKAIET VVETFGGLDI LIANAGGHGV GPTISMSDET WDLAVRLNLN TAFVSARESL PHLIKNKGNI IVLASIAGLF AGPDAAGYVT TKHACIGLAK SLARDYGRKG VRTNTVCPGW VTTDMADEQM QMIVEKFRLK SIEEAYALVT KDVPLGRPAS AEDVANAVCF LASSDASMIN GAILTVDGGA GTVDLPTLAF AE
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