| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4169 |
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| Symbol | |
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| ID | 4313064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1088974 |
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| End bp | 1089765 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638152010 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776056 |
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| Protein GI | 115358918 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACC CGCAACCCCG AACGATCGCG ATCACCGGTG CAGGCACCGG CATCGGCGCC
GCGTGCGCGC GCCGCTTCGC CGCCCGCGGC GAGCGCGTCG TATTGATCGG GCGGCGCCGG
GCACCGCTCG ACGCACTCGC CGCCGAGACC GGTGGCATCG CCCTCGCCGG CGACGCCGCG
AGCACGGCCG ACTGGACCCG CTTCCTACCG GAGATCGCCG GACGGTTCGG CCCCGTCGAC
GCGCTCGTCG CGTGCGCGGG CGGCCACGGC CTCGGCCGCG CGGAGGAAAC CGACGACGCG
CAATGGCGCG ACGCGATGCA CGCGAATCTC GACACCGCAT TCGTCAGCGC ACGCGCGTGC
CTGCCCGACC TGATCGCGCA GCGCGGCAGC ATCGTGCTGG TCGCGTCGAT CGCCGCGCTC
GCGGCCGGGC CGGGCGTGTG CGGCTATACG GTCGGCAAGC ATGCGCTGCT CGGGCTCGCG
CGGTCGCTCG CACGCGACTA CGGGCCGCAC GGCGTGCGTG CGAACGCGGT GTGTCCGGGC
TGGGTCCGCA CGCCGATGGC CGATGCGGAA ATGGCGCCGC TGATGTCCGC GCATGGCGAC
ACGCTCGACG GCGCGTATGC GCGCGTGAGC GCCGACGTGC CGCTGCGGCG CGCGGCCGAT
CCGGACGAAA TCGCGGCGGT GTGCGCATTC CTCGCATCGC CCGACGCGTC GTTCGTGACG
GGCGCGACGC TCGTCGCCGA CGGCGGCGCG ATGGTCGTCG ATGTGCCGAC GCTCGCGTTC
GACAAGCTTT GA
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| Protein sequence | MTHPQPRTIA ITGAGTGIGA ACARRFAARG ERVVLIGRRR APLDALAAET GGIALAGDAA
STADWTRFLP EIAGRFGPVD ALVACAGGHG LGRAEETDDA QWRDAMHANL DTAFVSARAC
LPDLIAQRGS IVLVASIAAL AAGPGVCGYT VGKHALLGLA RSLARDYGPH GVRANAVCPG
WVRTPMADAE MAPLMSAHGD TLDGAYARVS ADVPLRRAAD PDEIAAVCAF LASPDASFVT
GATLVADGGA MVVDVPTLAF DKL
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