Gene Mflv_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4505 
Symbol 
ID4975818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4797666 
End bp4798448 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID640458734 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001135762 
Protein GI145225084 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAC GGTTGGCAGG AAAGGTCGCG CTGATCAGCG GCGCCGCCAG GGGCATGGGA 
GCATCGCACG CGAGGGTGAT GGCCGGACAC GGAGCCAAGG TGGTGTGCGG CGACATCCTC
GACTCCGACG GTGAGGCGGT CGCCGCCGAA CTGGGCGACG CCGCGCGGTA CGTCCACCTC
GACGTCACCA GTCCGGACGA CTGGGACCGG GCCGTGGCGG CCGCGGTCGC CGACTTCGGG
GGCCTCGATG TGCTCGTCAA CAACGCCGGC ATCCTCAACA TCGGCACCGT GGAGGACTAC
GAGCTCTCGG AGTGGCACCG CATCCTCGAC GTGAACCTCA CCGGTGTGTT CCTCGGAATC
CGTGCCGCCA CACCGACGAT GAAGGCCGCC GGCCGGGGTT CCATCATCAA CATCGCGTCG
ATCGAGGGGA TGGCGGGCAC GGTCGGATGC CACGGCTACA CCGCGACGAA GTTCGCGGTA
CGCGGCCTTA CCAAGTCGAC CGCACTGGAG TTGGGCCCCT TCGGCATCCG GGTCAACTCG
GTGCATCCCG GTCTGGTGAA GACACCGATG GCCGACTGGG TGCCCGAGGA CATCTTCCAG
TCGGCTCTCG GCCGCATCGC CCAGCCCCAC GAGGTCAGCA ACCTCGTGGT GTACCTGGCC
AGTGACGAGT CCAGCTACTC GACGGGCGCC GAATTCGTGG TCGACGGAGG CACTCTCGCA
GGCCTTGCCC ACAAGGACTT CTCGGCCGTC GACGTCGATC AGCAGCCGGA GTGGATCACC
TAG
 
Protein sequence
MTGRLAGKVA LISGAARGMG ASHARVMAGH GAKVVCGDIL DSDGEAVAAE LGDAARYVHL 
DVTSPDDWDR AVAAAVADFG GLDVLVNNAG ILNIGTVEDY ELSEWHRILD VNLTGVFLGI
RAATPTMKAA GRGSIINIAS IEGMAGTVGC HGYTATKFAV RGLTKSTALE LGPFGIRVNS
VHPGLVKTPM ADWVPEDIFQ SALGRIAQPH EVSNLVVYLA SDESSYSTGA EFVVDGGTLA
GLAHKDFSAV DVDQQPEWIT