| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2581 |
|---|
| Symbol | ucpA |
|---|
| ID | 6143999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2635155 |
|---|
| End bp | 2635946 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641617452 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001744617 |
|---|
| Protein GI | 170683796 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAAC TCACGGGCAA GACAGCACTG ATTACGGGCG CATTGCAGGG AATTGGCGAA
GGAATTGCCA GAACTTTTGC GCGTCATGGC GCAAACCTAA TCTTGCTGGA TATCTCCCCT
GAGATCGAAA AGCTGGCGGA CGAACTGTGT GGTCGTGGTC ATCGCTGTAC GGCGGTTGTC
GCCGATGTGC GTGACCCGGC GTCGGTCGCC GCAGCTATCA AGCGTGCGAA GGAAAAAGAA
GGGCGCATTG ATATCCTGGT GAATAACGCA GGCGTTTGTC GTCTGGGAAG TTTCCTCGAT
ATGAGCGATG AAGATCGCGA TTTCCATATT GATATCAATA TAAAAGGCGT ATGGAACGTC
ACGAAGGCGG TGTTGCCGGA GATGATTGCC CGCAAAGATG GTCGCATTGT GATGATGTCT
TCAGTCACTG GCGATATGGT GGCCGATCCG GGTGAAACGG CGTATGCCTT AACGAAAGCG
GCGATTGTTG GCCTGACTAA ATCGCTGGCG GTGGAGTACG CGCAGTCTGG TATTCGCGTT
AACGCCATCT GCCCCGGATA CGTTCGCACG CCAATGGCGG AAAGCATTGC CCGCCAGTCG
AACCCGGAAG ATCCAGAATC GGTGCTGACT GAAATGGCGA AAGCAATCCC GATGCGTCGC
CTCGCCGATC CGCTGGAAGT CGGCGAACTG GCGGCCTTCC TCGCATCGGA TGAATCCAGC
TATTTAACCG GTACACAGAA TGTGATTGAT GGCGGCAGCA CACTGCCGGA GACGGTTAGC
GTCGGCATCT GA
|
|---|
| Protein sequence | MGKLTGKTAL ITGALQGIGE GIARTFARHG ANLILLDISP EIEKLADELC GRGHRCTAVV
ADVRDPASVA AAIKRAKEKE GRIDILVNNA GVCRLGSFLD MSDEDRDFHI DINIKGVWNV
TKAVLPEMIA RKDGRIVMMS SVTGDMVADP GETAYALTKA AIVGLTKSLA VEYAQSGIRV
NAICPGYVRT PMAESIARQS NPEDPESVLT EMAKAIPMRR LADPLEVGEL AAFLASDESS
YLTGTQNVID GGSTLPETVS VGI
|
|---|
| |