Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0934 |
Symbol | |
ID | 4811227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1121968 |
End bp | 1122711 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106353 |
Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
Protein accession | YP_001037361 |
Protein GI | 125973451 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00491532 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTGA AGGGAAAAAC TGCGATTGTA ACCGGCTCGA GCAGAGGCCT GGGGAAGGCT ATTGCGTGGA AATTGGGAAA TATGGGAGCA AATATCGTTC TTAACGGTTC ACCTGCTTCA ACCAGCCTTG ATGCCACTGC GGAGGAATTT AAAGCTGCCG GGATAAACGT TGTTGTTGCA AAAGGGGATG TAAAAAACCC TGAAGATGTT GAGAACATGG TTAAAACGGC AATGGATGCT TTCGGAAGAA TTGACATACT TGTAAATAAC GCAGGCATAA CCAGAGATAC GCTCATGCTG AAAATGTCTG AAAAAGATTG GGACGATGTT TTGAATACAA ACTTAAAAAG TGCCTATCTT TGTACAAAAG CTGTCTCCAA AATCATGTTA AAACAAAAAA GCGGTAAAAT TATAAATATT ACCTCTATTG CGGGTATTAT TGGTAATGCG GGTCAGGCCA ATTATGCAGC ATCAAAAGCT GGTTTAATAG GTTTTACAAA ATCAATCGCA AAGGAATTTG CCGCAAAGGG GATTTACTGT AATGCCGTGG CGCCGGGTAT AATAAAAACC GACATGACCG ATGTGTTACC TGACAAAGTA AAGGAAATGT ATTTGAATAA CATACCGCTT AAAAGGTTTG GGACGCCTGA AGAAGTGGCA AATGTTGTCG GTTTCCTTGC ATCTGACGAT TCAAATTATA TAACAGGTCA GGTAATAAAT ATTGACGGCG GATTGGTAAT GTAA
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Protein sequence | MQLKGKTAIV TGSSRGLGKA IAWKLGNMGA NIVLNGSPAS TSLDATAEEF KAAGINVVVA KGDVKNPEDV ENMVKTAMDA FGRIDILVNN AGITRDTLML KMSEKDWDDV LNTNLKSAYL CTKAVSKIML KQKSGKIINI TSIAGIIGNA GQANYAASKA GLIGFTKSIA KEFAAKGIYC NAVAPGIIKT DMTDVLPDKV KEMYLNNIPL KRFGTPEEVA NVVGFLASDD SNYITGQVIN IDGGLVM
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