Gene Cthe_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0934 
Symbol 
ID4811227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1121968 
End bp1122711 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content40% 
IMG OID640106353 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_001037361 
Protein GI125973451 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00491532 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTGA AGGGAAAAAC TGCGATTGTA ACCGGCTCGA GCAGAGGCCT GGGGAAGGCT 
ATTGCGTGGA AATTGGGAAA TATGGGAGCA AATATCGTTC TTAACGGTTC ACCTGCTTCA
ACCAGCCTTG ATGCCACTGC GGAGGAATTT AAAGCTGCCG GGATAAACGT TGTTGTTGCA
AAAGGGGATG TAAAAAACCC TGAAGATGTT GAGAACATGG TTAAAACGGC AATGGATGCT
TTCGGAAGAA TTGACATACT TGTAAATAAC GCAGGCATAA CCAGAGATAC GCTCATGCTG
AAAATGTCTG AAAAAGATTG GGACGATGTT TTGAATACAA ACTTAAAAAG TGCCTATCTT
TGTACAAAAG CTGTCTCCAA AATCATGTTA AAACAAAAAA GCGGTAAAAT TATAAATATT
ACCTCTATTG CGGGTATTAT TGGTAATGCG GGTCAGGCCA ATTATGCAGC ATCAAAAGCT
GGTTTAATAG GTTTTACAAA ATCAATCGCA AAGGAATTTG CCGCAAAGGG GATTTACTGT
AATGCCGTGG CGCCGGGTAT AATAAAAACC GACATGACCG ATGTGTTACC TGACAAAGTA
AAGGAAATGT ATTTGAATAA CATACCGCTT AAAAGGTTTG GGACGCCTGA AGAAGTGGCA
AATGTTGTCG GTTTCCTTGC ATCTGACGAT TCAAATTATA TAACAGGTCA GGTAATAAAT
ATTGACGGCG GATTGGTAAT GTAA
 
Protein sequence
MQLKGKTAIV TGSSRGLGKA IAWKLGNMGA NIVLNGSPAS TSLDATAEEF KAAGINVVVA 
KGDVKNPEDV ENMVKTAMDA FGRIDILVNN AGITRDTLML KMSEKDWDDV LNTNLKSAYL
CTKAVSKIML KQKSGKIINI TSIAGIIGNA GQANYAASKA GLIGFTKSIA KEFAAKGIYC
NAVAPGIIKT DMTDVLPDKV KEMYLNNIPL KRFGTPEEVA NVVGFLASDD SNYITGQVIN
IDGGLVM