Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5564 |
Symbol | |
ID | 6182491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 63616 |
End bp | 64398 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641688696 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001815560 |
Protein GI | 172064848 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGG ATGACAAGAT CGCGCTCGTG ACGGGCGCGG CAAGCGGTAT CGGCGCGGTG TGCGCGCGCA AGCTCGCGAT GGACGGCGCG ATGGTCGTTA TCGCGGACCT GAATCTCGAG GCTGCGCGAA AGGTTGCCGA CGACATCGTC GGCAACGGCG GGAAGGCGTT GGCGATCGCC ATGGACGTCA CCAGCGAGGA AGCCGTCGAC GCGGGGCTGG CCGAAACGGT AAGCCGGCTG GGCGGAATCG ACGTGCTCGT GTCGAACGCA GGCATCCAGA TCGTCAACCG GATCGAGGAT TACGCATTTT CGGACTGGAA GAAGATGCTG GCCATCCACC TCGATGGTGC GTTTCTGACG ACGCGGGCCG CCATCAGGCA TATGTATGCG TCGAACAAGG GTGGCACCGT GATCTACATG GGCTCGGTGC ATGCGCACGA GGCCTCGCCG CTCAAATCCG CCTATGTGAC CGCGAAACAC GGGTTGCTCG GTCTCGCACG GGTTGTCGCG AAAGAAGGTG GACCGCGTGG CGTGCGTGCC AACGTCGTGT GCCCCGGTTT CGTCAGGACC CCGCTGGTCG ACAAACAGAT CCCCGAGCAA GCGAAGGTCC TCGACATCTC GGAACAACAG GTCGTCAGGG ACGTCATGCT GAAAGAGACG GTCGACGGCG AATTCACGTC GCTGGTCGAT GTCGCGAACA CGGTTGCCTT CCTGGCCAGC TTCGAATCGA ACGCGCTCAC CGGGCAATCG ATCGTCGTCA GCCACGGCTG GTTCATGCAG TAA
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Protein sequence | MALDDKIALV TGAASGIGAV CARKLAMDGA MVVIADLNLE AARKVADDIV GNGGKALAIA MDVTSEEAVD AGLAETVSRL GGIDVLVSNA GIQIVNRIED YAFSDWKKML AIHLDGAFLT TRAAIRHMYA SNKGGTVIYM GSVHAHEASP LKSAYVTAKH GLLGLARVVA KEGGPRGVRA NVVCPGFVRT PLVDKQIPEQ AKVLDISEQQ VVRDVMLKET VDGEFTSLVD VANTVAFLAS FESNALTGQS IVVSHGWFMQ
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