Gene PCC7424_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0442 
Symbol 
ID7107387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp484459 
End bp485220 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content41% 
IMG OID643478715 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002375776 
Protein GI218437447 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGAG TGGCGTTAAT TACCGGGGCG GCAAGTGGCA TTGGTCGCGC TTGTGCAGCT 
AAATTTGCTC AACAAAATAT TAAAGTAGTC ATCGTAGATT TTCAAGCCGA TCAAGGTCAA
CAAGTCGCTC AGGAATTACA AGGTTTTTTT GTTCAAGCTG ATTTAACTCA ACCCGAAGAT
TGTCGTCAGG CGATCGATAA AACGGTTGAG CAATATGGAC AATTAGATAT ATTAGTTAAT
AATGCCGGTT TTCAACATAT CGATACAGTG GCGGATTTTC CGGAGGAAAC TTGGCATAAA
ATGATCGCTT TAATGTTGAA TGCTCCTTTT TTATTGACTA AATATGCTTG GTATTATTTG
ATTAAGTCAG GACAAGGACG CATTGTCAAT ATTGGCAGTG TTCATAGTTT AACTGCTAGT
CCGTTTAAAG TGGGATATGT GACCGCTAAA CATGGGTTAG TGGGTTTGAC TAAAGTGGTG
GCACTCGAAG GGGGTGAACA TGGGTTAACT TGTAATCTTG TCTGTCCCTC TTATGTGCGA
ACTCCTTTGG TTGAAAAGCA AATTTTGGAT CAATCTCGGA CTCTGGGAAT TGCACCGGAA
GAGGTTGAGG AAAAGGTATT TGGCGGCAAA ACGGTTATCA AAGATAAACG GCTTTTTGAA
CCTGAAGATG TGGCCAATTA TGTCGCTTTT TTATGTTCTC CTGAAGCTTG GGGAATTACC
GGAGCAATGC AAGTGATGGA TATGGCCTGG ACTGCACATT AA
 
Protein sequence
MTRVALITGA ASGIGRACAA KFAQQNIKVV IVDFQADQGQ QVAQELQGFF VQADLTQPED 
CRQAIDKTVE QYGQLDILVN NAGFQHIDTV ADFPEETWHK MIALMLNAPF LLTKYAWYYL
IKSGQGRIVN IGSVHSLTAS PFKVGYVTAK HGLVGLTKVV ALEGGEHGLT CNLVCPSYVR
TPLVEKQILD QSRTLGIAPE EVEEKVFGGK TVIKDKRLFE PEDVANYVAF LCSPEAWGIT
GAMQVMDMAW TAH