Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0442 |
Symbol | |
ID | 7107387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 484459 |
End bp | 485220 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643478715 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002375776 |
Protein GI | 218437447 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAGAG TGGCGTTAAT TACCGGGGCG GCAAGTGGCA TTGGTCGCGC TTGTGCAGCT AAATTTGCTC AACAAAATAT TAAAGTAGTC ATCGTAGATT TTCAAGCCGA TCAAGGTCAA CAAGTCGCTC AGGAATTACA AGGTTTTTTT GTTCAAGCTG ATTTAACTCA ACCCGAAGAT TGTCGTCAGG CGATCGATAA AACGGTTGAG CAATATGGAC AATTAGATAT ATTAGTTAAT AATGCCGGTT TTCAACATAT CGATACAGTG GCGGATTTTC CGGAGGAAAC TTGGCATAAA ATGATCGCTT TAATGTTGAA TGCTCCTTTT TTATTGACTA AATATGCTTG GTATTATTTG ATTAAGTCAG GACAAGGACG CATTGTCAAT ATTGGCAGTG TTCATAGTTT AACTGCTAGT CCGTTTAAAG TGGGATATGT GACCGCTAAA CATGGGTTAG TGGGTTTGAC TAAAGTGGTG GCACTCGAAG GGGGTGAACA TGGGTTAACT TGTAATCTTG TCTGTCCCTC TTATGTGCGA ACTCCTTTGG TTGAAAAGCA AATTTTGGAT CAATCTCGGA CTCTGGGAAT TGCACCGGAA GAGGTTGAGG AAAAGGTATT TGGCGGCAAA ACGGTTATCA AAGATAAACG GCTTTTTGAA CCTGAAGATG TGGCCAATTA TGTCGCTTTT TTATGTTCTC CTGAAGCTTG GGGAATTACC GGAGCAATGC AAGTGATGGA TATGGCCTGG ACTGCACATT AA
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Protein sequence | MTRVALITGA ASGIGRACAA KFAQQNIKVV IVDFQADQGQ QVAQELQGFF VQADLTQPED CRQAIDKTVE QYGQLDILVN NAGFQHIDTV ADFPEETWHK MIALMLNAPF LLTKYAWYYL IKSGQGRIVN IGSVHSLTAS PFKVGYVTAK HGLVGLTKVV ALEGGEHGLT CNLVCPSYVR TPLVEKQILD QSRTLGIAPE EVEEKVFGGK TVIKDKRLFE PEDVANYVAF LCSPEAWGIT GAMQVMDMAW TAH
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