| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5843 |
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| Symbol | |
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| ID | 5320145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 806942 |
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| End bp | 807727 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640777538 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001314470 |
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| Protein GI | 150377875 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.861263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATT TCAACGGCAA GAGTATCATC GTCACCGGAG GCAGTCTCGG CATGGGCCTC
GCCTGTGCCC GTCGCTTTGC CGCGGGCGGC GGCAAGGTGA TGATCGTGGC GAACGACAAG
GCTTCGGTCG ACAGTGCCGT TGCCGAGATC GGCGAGAACG CCGCCGGGTT TGTCGGCGAT
GTCCGCCGCA ACGACGATAT GGCGGCGGCG GTTCAGACCG CGGCATCGCG CCATGGCGGC
GTGGATGTTC TCGCCTGCTG CGCCGGCATT CAGCGCTACG GGACCGTGGT CGATACGCCG
GAAGAGGTCT GGGACGACGT TCTCGATATC AATCTGAAGG GCATCTTTCT CGCCTCCAAA
TTCGCAATCC CCGAAATGCG CAAGCGCGGC GGCGGCGCGA TCGTCGCCAT CTCATCCGTG
CAGGCCTATG CTTCGCAGGC GGGCGTCGCC GCCTATACGG CGAGCAAGGG CGCGATCAAC
GCGCTCGTGC GTGCCATGGC GCTCGACCAT GCCGGGGACA ATATCACGGT CAACGCCGTG
TGCCCCGCCT CCATCGATAC TCCGATGCTG CACTGGGCCG CTGATCTCTG GAAGGGTGAC
GGTACCGCCG AGGCGACGCT CGATGCCTGG GGCAGAGGGC ATCCACTCGG CCGCATAGGC
AAGCCTTGCG AAGTCGCCGA ACTGGTCGCC TTCCTCGCCA GCGAAAAAGC CCGCTTCATC
ACCGGCGCCG ACGTCAAGAT CGACGGCGGA GTCCTCTCCA AGCTCGGCAT CGTCATCCCA
GATTGA
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| Protein sequence | MSDFNGKSII VTGGSLGMGL ACARRFAAGG GKVMIVANDK ASVDSAVAEI GENAAGFVGD
VRRNDDMAAA VQTAASRHGG VDVLACCAGI QRYGTVVDTP EEVWDDVLDI NLKGIFLASK
FAIPEMRKRG GGAIVAISSV QAYASQAGVA AYTASKGAIN ALVRAMALDH AGDNITVNAV
CPASIDTPML HWAADLWKGD GTAEATLDAW GRGHPLGRIG KPCEVAELVA FLASEKARFI
TGADVKIDGG VLSKLGIVIP D
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