More than 300 homologs were found in PanDaTox collection
for query gene BBta_6394 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6394  haloacid dehalogenase-like hydrolase  100 
 
 
240 aa  478  1e-134  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.275881  normal 
 
 
-
 
NC_007964  Nham_1067  HAD family hydrolase  62.76 
 
 
249 aa  298  5e-80  Nitrobacter hamburgensis X14  Bacteria  normal  0.307396  n/a   
 
 
-
 
NC_007406  Nwi_0553  HAD family hydrolase  63.29 
 
 
247 aa  293  2e-78  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0732  HAD-superfamily hydrolase, subfamily IA, variant 3  52.04 
 
 
252 aa  209  4e-53  Halothiobacillus neapolitanus c2  Bacteria  normal  0.595583  n/a   
 
 
-
 
NC_011004  Rpal_5014  HAD-superfamily hydrolase, subfamily IA, variant 3  53.02 
 
 
248 aa  205  6e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.652483  n/a   
 
 
-
 
NC_007778  RPB_4341  HAD family hydrolase  53.49 
 
 
248 aa  202  5e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0493927 
 
 
-
 
NC_007952  Bxe_B2478  HAD family hydrolase  50.68 
 
 
254 aa  201  9.999999999999999e-51  Burkholderia xenovorans LB400  Bacteria  normal  0.0642975  normal  0.83029 
 
 
-
 
NC_007958  RPD_4237  HAD family hydrolase  51.16 
 
 
248 aa  199  3.9999999999999996e-50  Rhodopseudomonas palustris BisB5  Bacteria  hitchhiker  0.00960992  normal  0.35717 
 
 
-
 
NC_007925  RPC_2894  HAD family hydrolase  50.93 
 
 
233 aa  198  5e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.338332  normal  0.157794 
 
 
-
 
NC_009485  BBta_0457  putative haloacid dehalogenase-like hydrolase cbbY-like protein  48.17 
 
 
236 aa  196  4.0000000000000005e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0760422 
 
 
-
 
NC_007493  RSP_1279  CbbY family protein  48.62 
 
 
230 aa  192  6e-48  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.183021  n/a   
 
 
-
 
NC_009049  Rsph17029_2938  HAD family hydrolase  48.62 
 
 
230 aa  192  6e-48  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3262  hypothetical protein  50.46 
 
 
250 aa  186  4e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.343145 
 
 
-
 
NC_009428  Rsph17025_2709  HAD family hydrolase  49.54 
 
 
230 aa  185  5e-46  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.672792 
 
 
-
 
NC_007484  Noc_0880  HAD family hydrolase  47.96 
 
 
255 aa  183  2.0000000000000003e-45  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0690  HAD family hydrolase  48.4 
 
 
253 aa  182  3e-45  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.32351  normal  0.224311 
 
 
-
 
NC_013889  TK90_0853  HAD-superfamily hydrolase, subfamily IA, variant 3  47.49 
 
 
254 aa  181  6e-45  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0810  HAD family hydrolase  47.41 
 
 
241 aa  181  1e-44  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.731901  normal  0.645331 
 
 
-
 
NC_013161  Cyan8802_2025  HAD-superfamily hydrolase, subfamily IA, variant 3  45.95 
 
 
247 aa  180  2e-44  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2000  HAD-superfamily hydrolase, subfamily IA, variant 3  45.95 
 
 
247 aa  180  2e-44  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_4648  HAD family hydrolase  42.08 
 
 
252 aa  177  1e-43  Trichodesmium erythraeum IMS101  Bacteria  normal  0.842677  normal  0.864231 
 
 
-
 
NC_011761  AFE_1466  HAD-superfamily hydrolase, subfamily IA, variant 3  48.61 
 
 
254 aa  177  2e-43  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_5215  HAD-superfamily hydrolase, subfamily IA, variant 3  45.13 
 
 
248 aa  176  2e-43  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00121216 
 
 
-
 
NC_011206  Lferr_1182  HAD-superfamily hydrolase, subfamily IA, variant 3  48.61 
 
 
254 aa  177  2e-43  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.91289 
 
 
-
 
NC_010505  Mrad2831_3556  HAD family hydrolase  45.87 
 
 
262 aa  176  3e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0953  HAD-superfamily hydrolase, subfamily IA, variant 3  45.41 
 
 
253 aa  176  4e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0990  HAD family hydrolase  45.41 
 
 
253 aa  176  4e-43  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.480228 
 
 
-
 
NC_008825  Mpe_A1484  haloacid dehalogenase  49.08 
 
 
257 aa  176  4e-43  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.514428 
 
 
-
 
NC_007298  Daro_3629  HAD family hydrolase  49.55 
 
 
233 aa  175  5e-43  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.956312 
 
 
-
 
NC_007614  Nmul_A0608  HAD family hydrolase  46.4 
 
 
259 aa  175  7e-43  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.675821  n/a   
 
 
-
 
NC_010725  Mpop_0931  HAD-superfamily hydrolase, subfamily IA, variant 3  45.91 
 
 
253 aa  174  8e-43  Methylobacterium populi BJ001  Bacteria  normal  0.22053  normal  0.844847 
 
 
-
 
NC_011884  Cyan7425_3617  HAD-superfamily hydrolase, subfamily IA, variant 3  44.25 
 
 
256 aa  173  1.9999999999999998e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.675115  normal 
 
 
-
 
NC_008781  Pnap_1980  HAD family hydrolase  47.51 
 
 
253 aa  171  7.999999999999999e-42  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.294868  normal 
 
 
-
 
NC_007973  Rmet_1517  HAD family hydrolase  46.48 
 
 
272 aa  171  1e-41  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00550293  decreased coverage  0.0000688846 
 
 
-
 
NC_007520  Tcr_1242  HAD family hydrolase  42.41 
 
 
253 aa  170  2e-41  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.496272  n/a   
 
 
-
 
NC_008825  Mpe_A2785  haloacid dehalogenase  44.09 
 
 
267 aa  165  6.9999999999999995e-40  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3029  HAD-superfamily hydrolase, subfamily IA, variant 3  44.44 
 
 
267 aa  164  1.0000000000000001e-39  Variovorax paradoxus S110  Bacteria  normal  0.0148713  n/a   
 
 
-
 
NC_007604  Synpcc7942_1885  HAD family hydrolase  48.85 
 
 
255 aa  162  4.0000000000000004e-39  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1452  HAD family hydrolase  44.59 
 
 
241 aa  160  2e-38  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1033  HAD-superfamily hydrolase, subfamily IA, variant 3  45.13 
 
 
260 aa  156  3e-37  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0609  HAD-superfamily hydrolase, subfamily IA, variant 3  46.53 
 
 
249 aa  145  4.0000000000000006e-34  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.447765  n/a   
 
 
-
 
NC_010524  Lcho_3750  HAD family hydrolase  43.38 
 
 
249 aa  137  1e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.773366 
 
 
-
 
NC_010511  M446_2280  HAD family hydrolase  42.2 
 
 
256 aa  137  1e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.299074  normal  0.0109793 
 
 
-
 
NC_011894  Mnod_0323  HAD-superfamily hydrolase, subfamily IA, variant 3  41.18 
 
 
258 aa  136  3.0000000000000003e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009355  OSTLU_5695  predicted protein  35.84 
 
 
229 aa  136  4e-31  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_011678  PHATRDRAFT_12969  predicted protein  36.04 
 
 
244 aa  130  2.0000000000000002e-29  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_013235  Namu_3317  HAD-superfamily hydrolase, subfamily IA, variant 3  37.39 
 
 
262 aa  124  1e-27  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000267703  hitchhiker  0.00944163 
 
 
-
 
NC_013739  Cwoe_3124  HAD-superfamily hydrolase, subfamily IA, variant 3  36.28 
 
 
254 aa  122  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0079  HAD-superfamily hydrolase, subfamily IA, variant 3  39.37 
 
 
248 aa  120  1.9999999999999998e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1156  HAD family hydrolase  37.61 
 
 
251 aa  115  3.9999999999999997e-25  Synechococcus sp. CC9902  Bacteria  normal  0.10504  n/a   
 
 
-
 
NC_009976  P9211_09091  putative CbbY-like protein  30.09 
 
 
249 aa  108  7.000000000000001e-23  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.642347  hitchhiker  0.000010947 
 
 
-
 
NC_009091  P9301_10171  putative CbbY-like protein  29.35 
 
 
253 aa  106  4e-22  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.606492  n/a   
 
 
-
 
NC_008816  A9601_10181  putative CbbY-like protein  28.5 
 
 
253 aa  104  1e-21  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_009369  OSTLU_27888  predicted protein  35.32 
 
 
297 aa  103  3e-21  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0126093  normal  0.151084 
 
 
-
 
NC_008820  P9303_14541  putative CbbY-like protein  35.75 
 
 
252 aa  102  7e-21  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007577  PMT9312_0949  putative CbbY  28.57 
 
 
254 aa  99.8  3e-20  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.283596  n/a   
 
 
-
 
NC_007335  PMN2A_0356  HAD family hydrolase  31.09 
 
 
248 aa  99.4  5e-20  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.138453  n/a   
 
 
-
 
NC_011679  PHATR_13261  predicted protein  34.04 
 
 
238 aa  98.6  8e-20  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.684824  n/a   
 
 
-
 
NC_008819  NATL1_10371  putative CbbY-like protein  30.05 
 
 
248 aa  94  2e-18  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.549559  hitchhiker  0.0000687535 
 
 
-
 
NC_011831  Cagg_1516  HAD-superfamily hydrolase, subfamily IA, variant 3  34.17 
 
 
227 aa  86.3  4e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1064  haloacid dehalogenase-like hydrolase  31.4 
 
 
225 aa  85.9  6e-16  Jannaschia sp. CCS1  Bacteria  normal  0.0114019  normal 
 
 
-
 
NC_013457  VEA_000391  2-deoxyglucose-6-phosphate hydrolase YniC  29.36 
 
 
218 aa  85.5  7e-16  Vibrio sp. Ex25  Bacteria  normal  0.0106831  n/a   
 
 
-
 
NC_008817  P9515_09281  putative CbbY-like protein  26.24 
 
 
249 aa  85.5  8e-16  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1319  HAD family hydrolase  35.14 
 
 
259 aa  84.7  0.000000000000001  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0765605 
 
 
-
 
NC_008025  Dgeo_0096  HAD family hydrolase  35.4 
 
 
238 aa  84  0.000000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.803846  normal 
 
 
-
 
NC_013159  Svir_32070  haloacid dehalogenase superfamily enzyme, subfamily IA  33.33 
 
 
227 aa  83.2  0.000000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.466176  normal  0.444114 
 
 
-
 
NC_009654  Mmwyl1_0641  HAD family hydrolase  29.36 
 
 
220 aa  82.4  0.000000000000005  Marinomonas sp. MWYL1  Bacteria  normal  0.950078  normal  0.0427696 
 
 
-
 
NC_009767  Rcas_3766  HAD family hydrolase  34.33 
 
 
229 aa  82  0.000000000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.481305  normal  0.0631414 
 
 
-
 
NC_009523  RoseRS_3281  HAD family hydrolase  34.57 
 
 
221 aa  80.9  0.00000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_2690  HAD family hydrolase  28.99 
 
 
221 aa  79.7  0.00000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.365385  n/a   
 
 
-
 
NC_007512  Plut_2091  Beta-phosphoglucomutase hydrolase  31.25 
 
 
233 aa  79.7  0.00000000000004  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2485  HAD-superfamily hydrolase, subfamily IA, variant 3  31.94 
 
 
238 aa  79.7  0.00000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3315  HAD family hydrolase  31.37 
 
 
242 aa  79.7  0.00000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.354727 
 
 
-
 
NC_009012  Cthe_0780  HAD family hydrolase  31.28 
 
 
227 aa  78.6  0.00000000000009  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2469  HAD-superfamily hydrolase, subfamily IA, variant 3  35.18 
 
 
224 aa  77.8  0.0000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.618161  n/a   
 
 
-
 
NC_011661  Dtur_0461  HAD-superfamily hydrolase, subfamily IA, variant 3  29.41 
 
 
217 aa  77  0.0000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  30.23 
 
 
235 aa  77.8  0.0000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_012918  GM21_1179  HAD-superfamily hydrolase, subfamily IA, variant 3  32.27 
 
 
224 aa  77.4  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.0108500000000004e-18 
 
 
-
 
NC_011060  Ppha_2878  beta-phosphoglucomutase family hydrolase  27.85 
 
 
233 aa  75.5  0.0000000000006  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  31.82 
 
 
230 aa  75.5  0.0000000000007  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_009483  Gura_2233  HAD family hydrolase  31.08 
 
 
225 aa  75.5  0.0000000000007  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05174  phosphoglycolate phosphatase  30.29 
 
 
256 aa  75.5  0.0000000000008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_2267  HAD-superfamily hydrolase, subfamily IA, variant 3  25.51 
 
 
219 aa  74.7  0.000000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3082  HAD-superfamily hydrolase, subfamily IA, variant 3  31.36 
 
 
224 aa  74.7  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.48861  n/a   
 
 
-
 
NC_013947  Snas_4073  HAD-superfamily hydrolase subfamily IA, variant 3  29.32 
 
 
219 aa  74.7  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.358464  normal 
 
 
-
 
NC_012793  GWCH70_1743  HAD-superfamily hydrolase, subfamily IA, variant 3  28.05 
 
 
227 aa  74.3  0.000000000002  Geobacillus sp. WCH70  Bacteria  normal  0.293469  n/a   
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  30.48 
 
 
227 aa  73.9  0.000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2237  beta-phosphoglucomutase family hydrolase  29.47 
 
 
254 aa  73.9  0.000000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.202357  normal 
 
 
-
 
NC_004347  SO_0431  2-deoxyglucose-6-phosphatase  31.05 
 
 
217 aa  73.9  0.000000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3074  HAD family hydrolase  30.39 
 
 
222 aa  73.9  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0071  Beta-phosphoglucomutase hydrolase  29.41 
 
 
234 aa  73.9  0.000000000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0520  HAD-superfamily hydrolase, subfamily IA, variant 3  28.24 
 
 
217 aa  73.9  0.000000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7216  putative haloacid dehalogenase-like hydrolase  33.5 
 
 
223 aa  73.9  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  31.22 
 
 
232 aa  73.9  0.000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_007517  Gmet_1348  HAD family hydrolase  29.96 
 
 
226 aa  73.6  0.000000000003  Geobacter metallireducens GS-15  Bacteria  normal  0.523514  hitchhiker  0.0000000193697 
 
 
-
 
NC_013162  Coch_0471  HAD-superfamily hydrolase, subfamily IA, variant 3  25.91 
 
 
210 aa  73.6  0.000000000003  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0037  haloacid dehalogenase/epoxide hydrolase family protein  30.65 
 
 
219 aa  72.8  0.000000000004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1676  HAD-like hydrolase  33.33 
 
 
219 aa  72.8  0.000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.653252  normal  0.340852 
 
 
-
 
NC_010581  Bind_0935  HAD family hydrolase  30.23 
 
 
235 aa  72.8  0.000000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.941543  normal 
 
 
-
 
NC_009441  Fjoh_2777  HAD family hydrolase  23.5 
 
 
220 aa  72.8  0.000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0810098  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>